The complete chloroplast genome sequences of Barnardia japonica (Thunb.) Schult. and Schult.f
Barnardia japonica is an ornamental bulb with important medicinal usage. The complete chloroplast genome of B. japonica was newly sequenced in this study. The total chloroplast genome size of B. japonica was 156,129 bp. In total, 131 genes were identified, including 85 protein-coding genes, 8 rRNA g...
| Main Authors: | , , , , , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2018-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1481790 |
| _version_ | 1827774194378604544 |
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| author | Rui-Hong Wang Jing Gao Mengdi Li Xue Wu Chao Shen Junjie Wu Zhe-Chen Qi Pan Li |
| author_facet | Rui-Hong Wang Jing Gao Mengdi Li Xue Wu Chao Shen Junjie Wu Zhe-Chen Qi Pan Li |
| author_sort | Rui-Hong Wang |
| collection | DOAJ |
| description | Barnardia japonica is an ornamental bulb with important medicinal usage. The complete chloroplast genome of B. japonica was newly sequenced in this study. The total chloroplast genome size of B. japonica was 156,129 bp. In total, 131 genes were identified, including 85 protein-coding genes, 8 rRNA genes, and 38 tRNA genes. Eighteen genes are containing introns (clpP and ycf3 contained two introns) and 18 genes had two copies. The overall GC content of this genome was 37.7%. A further phylogenomic analysis of Asparagales, including 36 taxa, was conducted for the placement of genus Barnardia. The complete plastome of B. japonica will provide a valuable resource for further genetic conservation, phylogenomic, and evolution studies in the genus and family. |
| first_indexed | 2024-03-11T13:34:08Z |
| format | Article |
| id | doaj.art-29f13077add04d2783390029b7167dc4 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:34:08Z |
| publishDate | 2018-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-29f13077add04d2783390029b7167dc42023-11-02T15:57:24ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592018-07-013269769810.1080/23802359.2018.14817901481790The complete chloroplast genome sequences of Barnardia japonica (Thunb.) Schult. and Schult.fRui-Hong Wang0Jing Gao1Mengdi Li2Xue Wu3Chao Shen4Junjie Wu5Zhe-Chen Qi6Pan Li7Zhejiang Sci-Tech UniversityZhejiang Sci-Tech UniversityZhejiang Sci-Tech UniversityZhejiang Sci-Tech UniversityZhejiang Sci-Tech UniversityZhejiang Sci-Tech UniversityZhejiang Sci-Tech UniversityZhejiang UniversityBarnardia japonica is an ornamental bulb with important medicinal usage. The complete chloroplast genome of B. japonica was newly sequenced in this study. The total chloroplast genome size of B. japonica was 156,129 bp. In total, 131 genes were identified, including 85 protein-coding genes, 8 rRNA genes, and 38 tRNA genes. Eighteen genes are containing introns (clpP and ycf3 contained two introns) and 18 genes had two copies. The overall GC content of this genome was 37.7%. A further phylogenomic analysis of Asparagales, including 36 taxa, was conducted for the placement of genus Barnardia. The complete plastome of B. japonica will provide a valuable resource for further genetic conservation, phylogenomic, and evolution studies in the genus and family.http://dx.doi.org/10.1080/23802359.2018.1481790asparagaceaebarnardiachloroplast genomephylogenomics |
| spellingShingle | Rui-Hong Wang Jing Gao Mengdi Li Xue Wu Chao Shen Junjie Wu Zhe-Chen Qi Pan Li The complete chloroplast genome sequences of Barnardia japonica (Thunb.) Schult. and Schult.f Mitochondrial DNA. Part B. Resources asparagaceae barnardia chloroplast genome phylogenomics |
| title | The complete chloroplast genome sequences of Barnardia japonica (Thunb.) Schult. and Schult.f |
| title_full | The complete chloroplast genome sequences of Barnardia japonica (Thunb.) Schult. and Schult.f |
| title_fullStr | The complete chloroplast genome sequences of Barnardia japonica (Thunb.) Schult. and Schult.f |
| title_full_unstemmed | The complete chloroplast genome sequences of Barnardia japonica (Thunb.) Schult. and Schult.f |
| title_short | The complete chloroplast genome sequences of Barnardia japonica (Thunb.) Schult. and Schult.f |
| title_sort | complete chloroplast genome sequences of barnardia japonica thunb schult and schult f |
| topic | asparagaceae barnardia chloroplast genome phylogenomics |
| url | http://dx.doi.org/10.1080/23802359.2018.1481790 |
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