Comparing diversity patterns and processes of microbial community assembly in water column and sediment in Lake Wuchang, China
The study compare the diversity patterns and processes of microbial community assembly in the water and sediment of Lake Wuchang (China) using high-throughput sequencing of 16S rRNA gene amplicons. A higher microbial α-diversity in the sediment was revealed (P < 0.01), and the most common bacteri...
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PeerJ Inc.
2023-01-01
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| Online Access: | https://peerj.com/articles/14592.pdf |
| _version_ | 1827605569860534272 |
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| author | Xuemei Li Zihao Meng Kang Chen Feifei Hu Lu Liu Tingbing Zhu Deguo Yang |
| author_facet | Xuemei Li Zihao Meng Kang Chen Feifei Hu Lu Liu Tingbing Zhu Deguo Yang |
| author_sort | Xuemei Li |
| collection | DOAJ |
| description | The study compare the diversity patterns and processes of microbial community assembly in the water and sediment of Lake Wuchang (China) using high-throughput sequencing of 16S rRNA gene amplicons. A higher microbial α-diversity in the sediment was revealed (P < 0.01), and the most common bacterial phyla in water column were Proteobacteria, Cyanobacteria and Actinobacteria, while Proteobacteria, Acidobacteria, Chloroflexi and Nitrospirae were dominant in sediment. Functions related to phototrophy and nitrogen metabolism primarily occurred in the water column and sediment, respectively. The microbial communities in water column from different seasons were divided into three groups, while no such dispersion in sediment based on PCoA and ANOSIM. According to Pearson correlation analysis, water temperature, dissolved oxygen, water depth, total nitrogen, ammonium, and nitrite were key factors in determining microbial community structure in water column, while TN in sediment, conductivity, and organic matter were key factors in sediment. However, the stochastic processes (|βNTI| < 2) dominated community assembly in both the water column and sediment of Lake Wuchang. These data will provide a foundation for microbial development and utilization in lake water column and sediment under the circumstances of increasing tendency of lake ecological fishery in China. |
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| id | doaj.art-2a0e5226c8c44b849deb34bbd124501c |
| institution | Directory Open Access Journal |
| issn | 2167-8359 |
| language | English |
| last_indexed | 2024-03-09T06:22:34Z |
| publishDate | 2023-01-01 |
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| spelling | doaj.art-2a0e5226c8c44b849deb34bbd124501c2023-12-03T11:31:52ZengPeerJ Inc.PeerJ2167-83592023-01-0111e1459210.7717/peerj.14592Comparing diversity patterns and processes of microbial community assembly in water column and sediment in Lake Wuchang, ChinaXuemei LiZihao MengKang ChenFeifei HuLu LiuTingbing ZhuDeguo YangThe study compare the diversity patterns and processes of microbial community assembly in the water and sediment of Lake Wuchang (China) using high-throughput sequencing of 16S rRNA gene amplicons. A higher microbial α-diversity in the sediment was revealed (P < 0.01), and the most common bacterial phyla in water column were Proteobacteria, Cyanobacteria and Actinobacteria, while Proteobacteria, Acidobacteria, Chloroflexi and Nitrospirae were dominant in sediment. Functions related to phototrophy and nitrogen metabolism primarily occurred in the water column and sediment, respectively. The microbial communities in water column from different seasons were divided into three groups, while no such dispersion in sediment based on PCoA and ANOSIM. According to Pearson correlation analysis, water temperature, dissolved oxygen, water depth, total nitrogen, ammonium, and nitrite were key factors in determining microbial community structure in water column, while TN in sediment, conductivity, and organic matter were key factors in sediment. However, the stochastic processes (|βNTI| < 2) dominated community assembly in both the water column and sediment of Lake Wuchang. These data will provide a foundation for microbial development and utilization in lake water column and sediment under the circumstances of increasing tendency of lake ecological fishery in China.https://peerj.com/articles/14592.pdfMicrobial community assemblySpecies diversityFunctional diversityStochastic processesEnvironmental factorsLake Wuchang |
| spellingShingle | Xuemei Li Zihao Meng Kang Chen Feifei Hu Lu Liu Tingbing Zhu Deguo Yang Comparing diversity patterns and processes of microbial community assembly in water column and sediment in Lake Wuchang, China PeerJ Microbial community assembly Species diversity Functional diversity Stochastic processes Environmental factors Lake Wuchang |
| title | Comparing diversity patterns and processes of microbial community assembly in water column and sediment in Lake Wuchang, China |
| title_full | Comparing diversity patterns and processes of microbial community assembly in water column and sediment in Lake Wuchang, China |
| title_fullStr | Comparing diversity patterns and processes of microbial community assembly in water column and sediment in Lake Wuchang, China |
| title_full_unstemmed | Comparing diversity patterns and processes of microbial community assembly in water column and sediment in Lake Wuchang, China |
| title_short | Comparing diversity patterns and processes of microbial community assembly in water column and sediment in Lake Wuchang, China |
| title_sort | comparing diversity patterns and processes of microbial community assembly in water column and sediment in lake wuchang china |
| topic | Microbial community assembly Species diversity Functional diversity Stochastic processes Environmental factors Lake Wuchang |
| url | https://peerj.com/articles/14592.pdf |
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