Complete mitochondrial genome of a tropical sea cucumber, Stichopus chloronotus
In this study, we report the complete mitochondrial genome of Stichopus chloronotus. The mitogenome was 16,247 base pairs (58.55% A + T content) in length, comprising a total of 37 genes, including 13 protein-coding genes, 22 transfer RNA genes and 2 ribosomal RNA genes. To resolve the phylogenetic...
| Main Authors: | , , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-10-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1967218 |
| _version_ | 1827772358239191040 |
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| author | Xiaoying Chen Yuping Sun Hongxia Zhao Junru Hu Bing Chen Huo Li Wen Huang |
| author_facet | Xiaoying Chen Yuping Sun Hongxia Zhao Junru Hu Bing Chen Huo Li Wen Huang |
| author_sort | Xiaoying Chen |
| collection | DOAJ |
| description | In this study, we report the complete mitochondrial genome of Stichopus chloronotus. The mitogenome was 16,247 base pairs (58.55% A + T content) in length, comprising a total of 37 genes, including 13 protein-coding genes, 22 transfer RNA genes and 2 ribosomal RNA genes. To resolve the phylogenetic position of S. chloronotus, we analyzed all mitochondrial protein-coding genes from 27 species within the Echinodermata. The results showed that S. chloronotus belonged to the family Stichopodidae and was more closely related to tropical Stichopus species (S. horrens and S. monotuberculatus) than to other species. Our results will be useful for evolutionary analysis of sea cucumber species. |
| first_indexed | 2024-03-11T13:07:15Z |
| format | Article |
| id | doaj.art-2a32bf20c7aa4d70b2efe537ea6ad9db |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:07:15Z |
| publishDate | 2021-10-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-2a32bf20c7aa4d70b2efe537ea6ad9db2023-11-03T14:28:30ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-10-016102788279010.1080/23802359.2021.19672181967218Complete mitochondrial genome of a tropical sea cucumber, Stichopus chloronotusXiaoying Chen0Yuping Sun1Hongxia Zhao2Junru Hu3Bing Chen4Huo Li5Wen Huang6Laboratory of Aquatic Sciences, Key Laboratory of Animal Nutrition and Feed Science in South China, Ministry of Agriculture in Rural Affairs, Guangdong Key Laboratory of Animal Breeding and Nutrition, Institute of Animal Science, Guangdong Academy of Agricultural SciencesLaboratory of Aquatic Sciences, Key Laboratory of Animal Nutrition and Feed Science in South China, Ministry of Agriculture in Rural Affairs, Guangdong Key Laboratory of Animal Breeding and Nutrition, Institute of Animal Science, Guangdong Academy of Agricultural SciencesLaboratory of Aquatic Sciences, Key Laboratory of Animal Nutrition and Feed Science in South China, Ministry of Agriculture in Rural Affairs, Guangdong Key Laboratory of Animal Breeding and Nutrition, Institute of Animal Science, Guangdong Academy of Agricultural SciencesLaboratory of Aquatic Sciences, Key Laboratory of Animal Nutrition and Feed Science in South China, Ministry of Agriculture in Rural Affairs, Guangdong Key Laboratory of Animal Breeding and Nutrition, Institute of Animal Science, Guangdong Academy of Agricultural SciencesLaboratory of Aquatic Sciences, Key Laboratory of Animal Nutrition and Feed Science in South China, Ministry of Agriculture in Rural Affairs, Guangdong Key Laboratory of Animal Breeding and Nutrition, Institute of Animal Science, Guangdong Academy of Agricultural SciencesGuangdong Provincial Engineering and Technology Research Center, Doctoral Workstation of Guangdong Province, Guangdong Jinyang Biotechnology Co. LtdLaboratory of Aquatic Sciences, Key Laboratory of Animal Nutrition and Feed Science in South China, Ministry of Agriculture in Rural Affairs, Guangdong Key Laboratory of Animal Breeding and Nutrition, Institute of Animal Science, Guangdong Academy of Agricultural SciencesIn this study, we report the complete mitochondrial genome of Stichopus chloronotus. The mitogenome was 16,247 base pairs (58.55% A + T content) in length, comprising a total of 37 genes, including 13 protein-coding genes, 22 transfer RNA genes and 2 ribosomal RNA genes. To resolve the phylogenetic position of S. chloronotus, we analyzed all mitochondrial protein-coding genes from 27 species within the Echinodermata. The results showed that S. chloronotus belonged to the family Stichopodidae and was more closely related to tropical Stichopus species (S. horrens and S. monotuberculatus) than to other species. Our results will be useful for evolutionary analysis of sea cucumber species.http://dx.doi.org/10.1080/23802359.2021.1967218mitochondrial genomestichopus chloronotusphylogenetic analysis |
| spellingShingle | Xiaoying Chen Yuping Sun Hongxia Zhao Junru Hu Bing Chen Huo Li Wen Huang Complete mitochondrial genome of a tropical sea cucumber, Stichopus chloronotus Mitochondrial DNA. Part B. Resources mitochondrial genome stichopus chloronotus phylogenetic analysis |
| title | Complete mitochondrial genome of a tropical sea cucumber, Stichopus chloronotus |
| title_full | Complete mitochondrial genome of a tropical sea cucumber, Stichopus chloronotus |
| title_fullStr | Complete mitochondrial genome of a tropical sea cucumber, Stichopus chloronotus |
| title_full_unstemmed | Complete mitochondrial genome of a tropical sea cucumber, Stichopus chloronotus |
| title_short | Complete mitochondrial genome of a tropical sea cucumber, Stichopus chloronotus |
| title_sort | complete mitochondrial genome of a tropical sea cucumber stichopus chloronotus |
| topic | mitochondrial genome stichopus chloronotus phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2021.1967218 |
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