WGT: Tools and algorithms for recognizing, visualizing, and generating Wheeler graphs

Summary: A Wheeler graph represents a collection of strings in a way that is particularly easy to index and query. Such a graph is a practical choice for representing a graph-shaped pangenome, and it is the foundation for current graph-based pangenome indexes. However, there are no practical tools t...

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Bibliographic Details
Main Authors: Kuan-Hao Chao, Pei-Wei Chen, Sanjit A. Seshia, Ben Langmead
Format: Article
Language:English
Published: Elsevier 2023-08-01
Series:iScience
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2589004223014797