Deficiency of the splicing factor RBM10 limits EGFR inhibitor response in EGFR-mutant lung cancer

Molecularly targeted cancer therapy has improved outcomes for patients with cancer with targetable oncoproteins, such as mutant EGFR in lung cancer. Yet, the long-term survival of these patients remains limited, because treatment responses are typically incomplete. One potential explanation for the...

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Main Authors: Shigeki Nanjo, Wei Wu, Niki Karachaliou, Collin M. Blakely, Junji Suzuki, Yu-Ting Chou, Siraj M. Ali, D. Lucas Kerr, Victor R. Olivas, Jonathan Shue, Julia Rotow, Manasi K. Mayekar, Franziska Haderk, Nilanjana Chatterjee, Anatoly Urisman, Jia Chi Yeo, Anders J. Skanderup, Aaron C. Tan, Wai Leong Tam, Oscar Arrieta, Kazuyoshi Hosomichi, Akihiro Nishiyama, Seiji Yano, Yuriy Kirichok, Daniel S.W. Tan, Rafael Rosell, Ross A Okimoto, Trever G. Bivona
Format: Article
Language:English
Published: American Society for Clinical Investigation 2022-07-01
Series:The Journal of Clinical Investigation
Subjects:
Online Access:https://doi.org/10.1172/JCI145099
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author Shigeki Nanjo
Wei Wu
Niki Karachaliou
Collin M. Blakely
Junji Suzuki
Yu-Ting Chou
Siraj M. Ali
D. Lucas Kerr
Victor R. Olivas
Jonathan Shue
Julia Rotow
Manasi K. Mayekar
Franziska Haderk
Nilanjana Chatterjee
Anatoly Urisman
Jia Chi Yeo
Anders J. Skanderup
Aaron C. Tan
Wai Leong Tam
Oscar Arrieta
Kazuyoshi Hosomichi
Akihiro Nishiyama
Seiji Yano
Yuriy Kirichok
Daniel S.W. Tan
Rafael Rosell
Ross A Okimoto
Trever G. Bivona
author_facet Shigeki Nanjo
Wei Wu
Niki Karachaliou
Collin M. Blakely
Junji Suzuki
Yu-Ting Chou
Siraj M. Ali
D. Lucas Kerr
Victor R. Olivas
Jonathan Shue
Julia Rotow
Manasi K. Mayekar
Franziska Haderk
Nilanjana Chatterjee
Anatoly Urisman
Jia Chi Yeo
Anders J. Skanderup
Aaron C. Tan
Wai Leong Tam
Oscar Arrieta
Kazuyoshi Hosomichi
Akihiro Nishiyama
Seiji Yano
Yuriy Kirichok
Daniel S.W. Tan
Rafael Rosell
Ross A Okimoto
Trever G. Bivona
author_sort Shigeki Nanjo
collection DOAJ
description Molecularly targeted cancer therapy has improved outcomes for patients with cancer with targetable oncoproteins, such as mutant EGFR in lung cancer. Yet, the long-term survival of these patients remains limited, because treatment responses are typically incomplete. One potential explanation for the lack of complete and durable responses is that oncogene-driven cancers with activating mutations of EGFR often harbor additional co-occurring genetic alterations. This hypothesis remains untested for most genetic alterations that co-occur with mutant EGFR. Here, we report the functional impact of inactivating genetic alterations of the mRNA splicing factor RNA-binding motif 10 (RBM10) that co-occur with mutant EGFR. RBM10 deficiency decreased EGFR inhibitor efficacy in patient-derived EGFR-mutant tumor models. RBM10 modulated mRNA alternative splicing of the mitochondrial apoptotic regulator Bcl-x to regulate tumor cell apoptosis during treatment. Genetic inactivation of RBM10 diminished EGFR inhibitor–mediated apoptosis by decreasing the ratio of (proapoptotic) Bcl-xS to (antiapoptotic) Bcl-xL isoforms of Bcl-x. RBM10 deficiency was a biomarker of poor response to EGFR inhibitor treatment in clinical samples. Coinhibition of Bcl-xL and mutant EGFR overcame the resistance induced by RBM10 deficiency. This study sheds light on the role of co-occurring genetic alterations and on the effect of splicing factor deficiency on the modulation of sensitivity to targeted kinase inhibitor cancer therapy.
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spelling doaj.art-2ab24c64ef0a4efabc727bb6d42180182022-12-22T00:31:05ZengAmerican Society for Clinical InvestigationThe Journal of Clinical Investigation1558-82382022-07-0113213Deficiency of the splicing factor RBM10 limits EGFR inhibitor response in EGFR-mutant lung cancerShigeki NanjoWei WuNiki KarachaliouCollin M. BlakelyJunji SuzukiYu-Ting ChouSiraj M. AliD. Lucas KerrVictor R. OlivasJonathan ShueJulia RotowManasi K. MayekarFranziska HaderkNilanjana ChatterjeeAnatoly UrismanJia Chi YeoAnders J. SkanderupAaron C. TanWai Leong TamOscar ArrietaKazuyoshi HosomichiAkihiro NishiyamaSeiji YanoYuriy KirichokDaniel S.W. TanRafael RosellRoss A OkimotoTrever G. BivonaMolecularly targeted cancer therapy has improved outcomes for patients with cancer with targetable oncoproteins, such as mutant EGFR in lung cancer. Yet, the long-term survival of these patients remains limited, because treatment responses are typically incomplete. One potential explanation for the lack of complete and durable responses is that oncogene-driven cancers with activating mutations of EGFR often harbor additional co-occurring genetic alterations. This hypothesis remains untested for most genetic alterations that co-occur with mutant EGFR. Here, we report the functional impact of inactivating genetic alterations of the mRNA splicing factor RNA-binding motif 10 (RBM10) that co-occur with mutant EGFR. RBM10 deficiency decreased EGFR inhibitor efficacy in patient-derived EGFR-mutant tumor models. RBM10 modulated mRNA alternative splicing of the mitochondrial apoptotic regulator Bcl-x to regulate tumor cell apoptosis during treatment. Genetic inactivation of RBM10 diminished EGFR inhibitor–mediated apoptosis by decreasing the ratio of (proapoptotic) Bcl-xS to (antiapoptotic) Bcl-xL isoforms of Bcl-x. RBM10 deficiency was a biomarker of poor response to EGFR inhibitor treatment in clinical samples. Coinhibition of Bcl-xL and mutant EGFR overcame the resistance induced by RBM10 deficiency. This study sheds light on the role of co-occurring genetic alterations and on the effect of splicing factor deficiency on the modulation of sensitivity to targeted kinase inhibitor cancer therapy.https://doi.org/10.1172/JCI145099OncologyTherapeutics
spellingShingle Shigeki Nanjo
Wei Wu
Niki Karachaliou
Collin M. Blakely
Junji Suzuki
Yu-Ting Chou
Siraj M. Ali
D. Lucas Kerr
Victor R. Olivas
Jonathan Shue
Julia Rotow
Manasi K. Mayekar
Franziska Haderk
Nilanjana Chatterjee
Anatoly Urisman
Jia Chi Yeo
Anders J. Skanderup
Aaron C. Tan
Wai Leong Tam
Oscar Arrieta
Kazuyoshi Hosomichi
Akihiro Nishiyama
Seiji Yano
Yuriy Kirichok
Daniel S.W. Tan
Rafael Rosell
Ross A Okimoto
Trever G. Bivona
Deficiency of the splicing factor RBM10 limits EGFR inhibitor response in EGFR-mutant lung cancer
The Journal of Clinical Investigation
Oncology
Therapeutics
title Deficiency of the splicing factor RBM10 limits EGFR inhibitor response in EGFR-mutant lung cancer
title_full Deficiency of the splicing factor RBM10 limits EGFR inhibitor response in EGFR-mutant lung cancer
title_fullStr Deficiency of the splicing factor RBM10 limits EGFR inhibitor response in EGFR-mutant lung cancer
title_full_unstemmed Deficiency of the splicing factor RBM10 limits EGFR inhibitor response in EGFR-mutant lung cancer
title_short Deficiency of the splicing factor RBM10 limits EGFR inhibitor response in EGFR-mutant lung cancer
title_sort deficiency of the splicing factor rbm10 limits egfr inhibitor response in egfr mutant lung cancer
topic Oncology
Therapeutics
url https://doi.org/10.1172/JCI145099
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