An Empirical Mode Decomposition-Based Method to Identify Topologically Associated Domains from Chromatin Interactions
Topologically associated domains (TADs) represent essential units constituting chromatin’s intricate three-dimensional spatial organization. TADs are stably present across cell types and species, and their influence on vital biological processes, such as gene expression, DNA replication, and chromos...
Main Authors: | Xuemin Zhao, Ran Duan, Shaowen Yao |
---|---|
Format: | Article |
Language: | English |
Published: |
MDPI AG
2023-10-01
|
Series: | Electronics |
Subjects: | |
Online Access: | https://www.mdpi.com/2079-9292/12/19/4154 |
Similar Items
-
An Improved Signal Processing Approach Based on Analysis Mode Decomposition and Empirical Mode Decomposition
by: Zhongzhe Chen, et al.
Published: (2019-08-01) -
An effective electrocardiogram segments denoising method combined with ensemble empirical mode decomposition, empirical mode decomposition, and wavelet packet
by: Yaru Yue, et al.
Published: (2023-06-01) -
HPTAD: A computational method to identify topologically associating domains from HiChIP and PLAC-seq datasets
by: Jonathan Rosen, et al.
Published: (2023-01-01) -
TADMaster: a comprehensive web-based tool for the analysis of topologically associated domains
by: Sean Higgins, et al.
Published: (2022-11-01) -
TOAST: A novel method for identifying topologically associated domains based on graph auto-encoders and clustering
by: Haiyan Gong, et al.
Published: (2023-01-01)