The complete chloroplast genome of Magnolia omeiensis, an endangered and endemic species in China
The first complete chloroplast (cp) genome of the Chinese endemic and endangered species, Magnolia omeiensis, were reported in this study. The M. omeiensis cp genome was 160,091 bp in length, with two inverted repeat (IR) regions of 26,584 bp, one large single-copy (LSC) region of 88,160 bp, and one...
| Main Authors: | , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1616627 |
| _version_ | 1797639838150688768 |
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| author | Li-Zhen Ling Shu-Dong Zhang |
| author_facet | Li-Zhen Ling Shu-Dong Zhang |
| author_sort | Li-Zhen Ling |
| collection | DOAJ |
| description | The first complete chloroplast (cp) genome of the Chinese endemic and endangered species, Magnolia omeiensis, were reported in this study. The M. omeiensis cp genome was 160,091 bp in length, with two inverted repeat (IR) regions of 26,584 bp, one large single-copy (LSC) region of 88,160 bp, and one small single-copy (SSC) region of 18,763 bp. The cp genome of this species contained 113 unique genes, including 79 protein-coding genes, four ribosomal RNA, and 30 transfer RNA genes. The overall GC content was 39.3%. Phylogenetic analysis of 24 representative cp genomes within the genus Magnolia suggested M. omeiensis is closely related to M. yunnanensis. |
| first_indexed | 2024-03-11T13:22:11Z |
| format | Article |
| id | doaj.art-2c06a52da5954a8ebfdf2a5ef18b7211 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:22:11Z |
| publishDate | 2019-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-2c06a52da5954a8ebfdf2a5ef18b72112023-11-03T10:06:46ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-01-01411909191010.1080/23802359.2019.16166271616627The complete chloroplast genome of Magnolia omeiensis, an endangered and endemic species in ChinaLi-Zhen Ling0Shu-Dong Zhang1Liupanshui Normal UniversityLiupanshui Normal UniversityThe first complete chloroplast (cp) genome of the Chinese endemic and endangered species, Magnolia omeiensis, were reported in this study. The M. omeiensis cp genome was 160,091 bp in length, with two inverted repeat (IR) regions of 26,584 bp, one large single-copy (LSC) region of 88,160 bp, and one small single-copy (SSC) region of 18,763 bp. The cp genome of this species contained 113 unique genes, including 79 protein-coding genes, four ribosomal RNA, and 30 transfer RNA genes. The overall GC content was 39.3%. Phylogenetic analysis of 24 representative cp genomes within the genus Magnolia suggested M. omeiensis is closely related to M. yunnanensis.http://dx.doi.org/10.1080/23802359.2019.1616627chloroplast genomephylogenetic analysismagnolia omeiensismagnoliaceae |
| spellingShingle | Li-Zhen Ling Shu-Dong Zhang The complete chloroplast genome of Magnolia omeiensis, an endangered and endemic species in China Mitochondrial DNA. Part B. Resources chloroplast genome phylogenetic analysis magnolia omeiensis magnoliaceae |
| title | The complete chloroplast genome of Magnolia omeiensis, an endangered and endemic species in China |
| title_full | The complete chloroplast genome of Magnolia omeiensis, an endangered and endemic species in China |
| title_fullStr | The complete chloroplast genome of Magnolia omeiensis, an endangered and endemic species in China |
| title_full_unstemmed | The complete chloroplast genome of Magnolia omeiensis, an endangered and endemic species in China |
| title_short | The complete chloroplast genome of Magnolia omeiensis, an endangered and endemic species in China |
| title_sort | complete chloroplast genome of magnolia omeiensis an endangered and endemic species in china |
| topic | chloroplast genome phylogenetic analysis magnolia omeiensis magnoliaceae |
| url | http://dx.doi.org/10.1080/23802359.2019.1616627 |
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