Characteristics and phylogenetic analysis of the complete chloroplast genome of Primulina hedyotidea
Primulina hedyotidea (Woon Young Chun) Yin Zheng Wang 2011 is an important medicinal plant that has a long history of medicinal use in China. In this experiment, the whole chloroplast genome of P. hedyotidea was determined by next-generation sequencing technology. The total base length of P. hedyoti...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2023-09-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2023.2238932 |
| _version_ | 1797638484293320704 |
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| author | Haicheng Wen Yongjing Su Ao Xie Chen Lin Wei Wei |
| author_facet | Haicheng Wen Yongjing Su Ao Xie Chen Lin Wei Wei |
| author_sort | Haicheng Wen |
| collection | DOAJ |
| description | Primulina hedyotidea (Woon Young Chun) Yin Zheng Wang 2011 is an important medicinal plant that has a long history of medicinal use in China. In this experiment, the whole chloroplast genome of P. hedyotidea was determined by next-generation sequencing technology. The total base length of P. hedyotidea was 153,297 bp, the GC content was 37.62%, the inverted repeat (IR) region length was 25,494 bp, the large single copy (LSC) region was 84,158 bp and the small single copy (SSC) region was 18,151 bp. In addition, the genome consisted of 80 protein-coding genes, 4 rRNA genes, and 28 tRNA genes, for a total of 112 genes. A phylogenetic tree was constructed to explore the evolutionary relationship between P. hedyotidea and other species. The findings of phylogenetic tree analysis show that Primulina huaijiensis and P. hedyotidea have a close relationship, and this study can help with species identification and phylogenetic analysis within Primulina and Gesneriaceae species. |
| first_indexed | 2024-03-11T13:04:00Z |
| format | Article |
| id | doaj.art-2c1ebc3c9c2a4b4ca2e64acfbade1488 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:04:00Z |
| publishDate | 2023-09-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-2c1ebc3c9c2a4b4ca2e64acfbade14882023-11-03T14:44:07ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592023-09-01891007101110.1080/23802359.2023.22389322238932Characteristics and phylogenetic analysis of the complete chloroplast genome of Primulina hedyotideaHaicheng Wen0Yongjing Su1Ao Xie2Chen Lin3Wei Wei4Guangxi University of Chinese MedicineGuangxi University of Chinese MedicineGuangxi University of Chinese MedicineGuangxi University of Chinese MedicineGuangxi University of Chinese MedicinePrimulina hedyotidea (Woon Young Chun) Yin Zheng Wang 2011 is an important medicinal plant that has a long history of medicinal use in China. In this experiment, the whole chloroplast genome of P. hedyotidea was determined by next-generation sequencing technology. The total base length of P. hedyotidea was 153,297 bp, the GC content was 37.62%, the inverted repeat (IR) region length was 25,494 bp, the large single copy (LSC) region was 84,158 bp and the small single copy (SSC) region was 18,151 bp. In addition, the genome consisted of 80 protein-coding genes, 4 rRNA genes, and 28 tRNA genes, for a total of 112 genes. A phylogenetic tree was constructed to explore the evolutionary relationship between P. hedyotidea and other species. The findings of phylogenetic tree analysis show that Primulina huaijiensis and P. hedyotidea have a close relationship, and this study can help with species identification and phylogenetic analysis within Primulina and Gesneriaceae species.http://dx.doi.org/10.1080/23802359.2023.2238932chloroplast genomeprimulina hedyotideaphylogenetic tree |
| spellingShingle | Haicheng Wen Yongjing Su Ao Xie Chen Lin Wei Wei Characteristics and phylogenetic analysis of the complete chloroplast genome of Primulina hedyotidea Mitochondrial DNA. Part B. Resources chloroplast genome primulina hedyotidea phylogenetic tree |
| title | Characteristics and phylogenetic analysis of the complete chloroplast genome of Primulina hedyotidea |
| title_full | Characteristics and phylogenetic analysis of the complete chloroplast genome of Primulina hedyotidea |
| title_fullStr | Characteristics and phylogenetic analysis of the complete chloroplast genome of Primulina hedyotidea |
| title_full_unstemmed | Characteristics and phylogenetic analysis of the complete chloroplast genome of Primulina hedyotidea |
| title_short | Characteristics and phylogenetic analysis of the complete chloroplast genome of Primulina hedyotidea |
| title_sort | characteristics and phylogenetic analysis of the complete chloroplast genome of primulina hedyotidea |
| topic | chloroplast genome primulina hedyotidea phylogenetic tree |
| url | http://dx.doi.org/10.1080/23802359.2023.2238932 |
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