The complete mitochondrial genome of Geoemyda spengleri its phylogenetic implications
In this study, we determined the entire mitochondrial genome of Geoemyda spengleri. The complete mitogenome sequence was 17,448 bp in length, containing 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, and 2 ribosomal RNA (rRNA) genes; it also featured a control region (D-Loop). The ove...
| Main Authors: | , , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1541715 |
| _version_ | 1797640566461169664 |
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| author | Yinan Xu Jiayu Liu Enze Jiang Chong Chen Fangyong Ning Zhiheng Du Xiujuan Bai |
| author_facet | Yinan Xu Jiayu Liu Enze Jiang Chong Chen Fangyong Ning Zhiheng Du Xiujuan Bai |
| author_sort | Yinan Xu |
| collection | DOAJ |
| description | In this study, we determined the entire mitochondrial genome of Geoemyda spengleri. The complete mitogenome sequence was 17,448 bp in length, containing 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, and 2 ribosomal RNA (rRNA) genes; it also featured a control region (D-Loop). The overall nucleotide composition was as follows: A, 33.7%; T, 27.6%; C, 25.6%; and G, 13.1%, with a total A + T content of 61.3%. The phylogenetic analysis demonstrated a close relationship between G. spengleri, Sacalia quadriocellata, Sacalia bealei, Cyclemys oldhamii, and other species in Geoemydidae. |
| first_indexed | 2024-03-11T13:33:15Z |
| format | Article |
| id | doaj.art-2d1c427a81a84051afaded693e71ff28 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:33:15Z |
| publishDate | 2019-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-2d1c427a81a84051afaded693e71ff282023-11-02T16:07:23ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-01-014191091110.1080/23802359.2018.15417151541715The complete mitochondrial genome of Geoemyda spengleri its phylogenetic implicationsYinan Xu0Jiayu Liu1Enze Jiang2Chong Chen3Fangyong Ning4Zhiheng Du5Xiujuan Bai6Northeast Agricultural UniversityNortheast Agricultural UniversityNortheast Agricultural UniversityNortheast Agricultural UniversityNortheast Agricultural UniversityNortheast Agricultural UniversityNortheast Agricultural UniversityIn this study, we determined the entire mitochondrial genome of Geoemyda spengleri. The complete mitogenome sequence was 17,448 bp in length, containing 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, and 2 ribosomal RNA (rRNA) genes; it also featured a control region (D-Loop). The overall nucleotide composition was as follows: A, 33.7%; T, 27.6%; C, 25.6%; and G, 13.1%, with a total A + T content of 61.3%. The phylogenetic analysis demonstrated a close relationship between G. spengleri, Sacalia quadriocellata, Sacalia bealei, Cyclemys oldhamii, and other species in Geoemydidae.http://dx.doi.org/10.1080/23802359.2018.1541715geoemyda spenglerimitogenomeconservation geneticstaxonomy |
| spellingShingle | Yinan Xu Jiayu Liu Enze Jiang Chong Chen Fangyong Ning Zhiheng Du Xiujuan Bai The complete mitochondrial genome of Geoemyda spengleri its phylogenetic implications Mitochondrial DNA. Part B. Resources geoemyda spengleri mitogenome conservation genetics taxonomy |
| title | The complete mitochondrial genome of Geoemyda spengleri its phylogenetic implications |
| title_full | The complete mitochondrial genome of Geoemyda spengleri its phylogenetic implications |
| title_fullStr | The complete mitochondrial genome of Geoemyda spengleri its phylogenetic implications |
| title_full_unstemmed | The complete mitochondrial genome of Geoemyda spengleri its phylogenetic implications |
| title_short | The complete mitochondrial genome of Geoemyda spengleri its phylogenetic implications |
| title_sort | complete mitochondrial genome of geoemyda spengleri its phylogenetic implications |
| topic | geoemyda spengleri mitogenome conservation genetics taxonomy |
| url | http://dx.doi.org/10.1080/23802359.2018.1541715 |
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