The complete mitochondrial genome of the horned lizard Phrynosoma blainvillii (Squamata: Phrynosomatidae) from California, USA

The complete mitochondrial genome of the horned lizard Phrynosoma blainvillii (Squamata: Phrynosomatidae) from California, USA

Analysis of Phrynosoma blainvillii Gray from Marina, Monterey County, California, using 150 bp paired-end Illumina sequences (Illumina, San Diego, CA) resulted in the assembly of its complete mitogenome. The mitogenome is 16,946 bp in length and contains a putative origin of light strand replication...

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Bibliographic Details
Main Authors: Laura Ayala, Ga Hun Boo, Sung Min Boo, Brandon Cluff, Gage H. Dayton, Leah Edwards, Armando Garcia, Mariana Gomez, Thomas A. Jimenez, Jeffery R. Hughey, Timothy Huynh, Natalia I. Marquez, Ana I. Meza, Alexis D. Munoz, Cristina Perez, Dominic Pina, Michael Porras, Paola E. Razo, Alexis Rosales, Bailee Rusconi, Noel Salvador, Alicia Steinhardt, Ruben Tinajero, Nancy Wheat, Frances L. Wong, Ann Wright, Hartnell College Genomics Group
Format: Article
Language:English
Published: Taylor & Francis Group 2017-12-01
Series:Mitochondrial DNA. Part B. Resources
Subjects:
horned lizard
mitogenome
phrynosoma blainvillii
phrynosomatidae
special concern
squamata
Online Access:http://dx.doi.org/10.1080/23802359.2017.1407706
Description
Summary:Analysis of Phrynosoma blainvillii Gray from Marina, Monterey County, California, using 150 bp paired-end Illumina sequences (Illumina, San Diego, CA) resulted in the assembly of its complete mitogenome. The mitogenome is 16,946 bp in length and contains a putative origin of light strand replication (OL), control region, 22 tRNA, 2 rRNA, and 13 protein-coding genes. Its content and organization are similar to other Squamata. Phylogenetic analysis of P. blainvillii resolves it in a clade with P. sherbrookei Nieto-Montes de Oca, Arenas-Moreno, Beltrán-Sánchez & Leaché, sister in position to Uma notata Baird. Mitochondrial marker analysis of P. blainvillii from Marina shows that it belongs to a coastal Santa Lucia Mountain Range haplogroup that is distinct from other populations of P. blainvillii in California.
ISSN:2380-2359

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