NCodR: A multi-class support vector machine classification to distinguish non-coding RNAs in Viridiplantae

NCodR: A multi-class support vector machine classification to distinguish non-coding RNAs in Viridiplantae

Non-coding RNAs (ncRNAs) are major players in the regulation of gene expression. This study analyses seven classes of ncRNAs in plants using sequence and secondary structure-based RNA folding measures. We observe distinct regions in the distribution of AU content along with overlapping regions for d...

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Bibliographic Details
Main Authors: Chandran Nithin, Sunandan Mukherjee, Jolly Basak, Ranjit Prasad Bahadur
Format: Article
Language:English
Published: Cambridge University Press 2022-01-01
Series:Quantitative Plant Biology
Subjects:
k-mer repeats
ncRNA prediction
non-coding RNA
RNA folding
SVM classifier
Online Access:https://www.cambridge.org/core/product/identifier/S2632882822000182/type/journal_article

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