Characterization of the complete chloroplast genome sequence of Hemsleya zhejiangensis (cucurbitaceae), a rare and endangered wild plant species in Zhejiang province, China
Hemsleya zhejiangensis is a rare and endangered plant species which is listed as a key protected wild plant in Zhejiang province, China. In our present study, we assembled the complete chloroplast (CP) genome of H. zhejiangensis using high-throughput sequencing data. The whole genome sequence of H....
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1692726 |
| _version_ | 1827773178408075264 |
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| author | Yanrong Li Jinghui Li Lingli Fang Ming Jiang |
| author_facet | Yanrong Li Jinghui Li Lingli Fang Ming Jiang |
| author_sort | Yanrong Li |
| collection | DOAJ |
| description | Hemsleya zhejiangensis is a rare and endangered plant species which is listed as a key protected wild plant in Zhejiang province, China. In our present study, we assembled the complete chloroplast (CP) genome of H. zhejiangensis using high-throughput sequencing data. The whole genome sequence of H. zhejiangensis is 157,289 bp in size, with a GC content of 37.1%. Sequencing analyses reveal that the CP genome encodes 133 genes, including 84 protein-coding genes, 8 rRNA genes, 37 tRNA genes, and four pseudogenes. Phylogenetic analysis results indicate that H. zhejiangensis is clustered with H. lijiangensis, with a support value of 100%, and they are sister to the three Gynostemma species. |
| first_indexed | 2024-03-11T13:18:20Z |
| format | Article |
| id | doaj.art-2e9715e6adbc492e81bc7ec3da769d08 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:18:20Z |
| publishDate | 2019-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-2e9715e6adbc492e81bc7ec3da769d082023-11-03T10:38:52ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-07-01424098409910.1080/23802359.2019.16927261692726Characterization of the complete chloroplast genome sequence of Hemsleya zhejiangensis (cucurbitaceae), a rare and endangered wild plant species in Zhejiang province, ChinaYanrong Li0Jinghui Li1Lingli Fang2Ming Jiang3College of Life Science Taizhou UniversityCollege of Life Science Taizhou UniversityCollege of Life Science Taizhou UniversityCollege of Life Science Taizhou UniversityHemsleya zhejiangensis is a rare and endangered plant species which is listed as a key protected wild plant in Zhejiang province, China. In our present study, we assembled the complete chloroplast (CP) genome of H. zhejiangensis using high-throughput sequencing data. The whole genome sequence of H. zhejiangensis is 157,289 bp in size, with a GC content of 37.1%. Sequencing analyses reveal that the CP genome encodes 133 genes, including 84 protein-coding genes, 8 rRNA genes, 37 tRNA genes, and four pseudogenes. Phylogenetic analysis results indicate that H. zhejiangensis is clustered with H. lijiangensis, with a support value of 100%, and they are sister to the three Gynostemma species.http://dx.doi.org/10.1080/23802359.2019.1692726hemsleya zhejiangensischloroplast genomephylogenetic analysis |
| spellingShingle | Yanrong Li Jinghui Li Lingli Fang Ming Jiang Characterization of the complete chloroplast genome sequence of Hemsleya zhejiangensis (cucurbitaceae), a rare and endangered wild plant species in Zhejiang province, China Mitochondrial DNA. Part B. Resources hemsleya zhejiangensis chloroplast genome phylogenetic analysis |
| title | Characterization of the complete chloroplast genome sequence of Hemsleya zhejiangensis (cucurbitaceae), a rare and endangered wild plant species in Zhejiang province, China |
| title_full | Characterization of the complete chloroplast genome sequence of Hemsleya zhejiangensis (cucurbitaceae), a rare and endangered wild plant species in Zhejiang province, China |
| title_fullStr | Characterization of the complete chloroplast genome sequence of Hemsleya zhejiangensis (cucurbitaceae), a rare and endangered wild plant species in Zhejiang province, China |
| title_full_unstemmed | Characterization of the complete chloroplast genome sequence of Hemsleya zhejiangensis (cucurbitaceae), a rare and endangered wild plant species in Zhejiang province, China |
| title_short | Characterization of the complete chloroplast genome sequence of Hemsleya zhejiangensis (cucurbitaceae), a rare and endangered wild plant species in Zhejiang province, China |
| title_sort | characterization of the complete chloroplast genome sequence of hemsleya zhejiangensis cucurbitaceae a rare and endangered wild plant species in zhejiang province china |
| topic | hemsleya zhejiangensis chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2019.1692726 |
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