Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate
Gardenia jasminoides Ellis is a traditional aromatic and medicinal plant in China. Here, the complete chloroplast genome of a wild-type gardenia adapted to island climate was assembled. The assembled genome was 155,247 bp in length, with four typical regions, i.e., a large single-copy (LSC) region (...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-02-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1861997 |
| _version_ | 1797638992013819904 |
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| author | Min Zhang Wan-Dong Chen Yuan-Yuan Li Cheng Zhang Zi-Han Chai Yong-Fu Li Shang-Wei Xie Shao-Yong Deng Yi-Fan Duan Xian-Rong Wang |
| author_facet | Min Zhang Wan-Dong Chen Yuan-Yuan Li Cheng Zhang Zi-Han Chai Yong-Fu Li Shang-Wei Xie Shao-Yong Deng Yi-Fan Duan Xian-Rong Wang |
| author_sort | Min Zhang |
| collection | DOAJ |
| description | Gardenia jasminoides Ellis is a traditional aromatic and medicinal plant in China. Here, the complete chloroplast genome of a wild-type gardenia adapted to island climate was assembled. The assembled genome was 155,247 bp in length, with four typical regions, i.e., a large single-copy (LSC) region (85,414 bp), a small single-copy (SSC) region (18,235 bp) and two inverted repeats (IRs) regions (25,799 bp each). In total, 138 genes were predicted, including 90 protein-coding genes, 40 tRNA genes and eight rRNA genes. The overall GC content of the chloroplast genome was 37.5%. The chloroplast genome would provide more information for the phylogeography and phylogeny study of G. jasminoides. |
| first_indexed | 2024-03-11T13:11:24Z |
| format | Article |
| id | doaj.art-2ea7a9a018444098849c84e18c1c4ffe |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:11:24Z |
| publishDate | 2021-02-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-2ea7a9a018444098849c84e18c1c4ffe2023-11-03T14:08:18ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-02-016231331410.1080/23802359.2020.18619971861997Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climateMin Zhang0Wan-Dong Chen1Yuan-Yuan Li2Cheng Zhang3Zi-Han Chai4Yong-Fu Li5Shang-Wei Xie6Shao-Yong Deng7Yi-Fan Duan8Xian-Rong Wang9Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Nanjing Forestry UniversityNanji Islands National Marine Natural Reserve AdministrationCo-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Nanjing Forestry UniversityCo-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Nanjing Forestry UniversityCo-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Nanjing Forestry UniversityCo-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Nanjing Forestry UniversityNanji Islands National Marine Natural Reserve AdministrationJiangxi Academy of ForestryCo-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Nanjing Forestry UniversityCo-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Nanjing Forestry UniversityGardenia jasminoides Ellis is a traditional aromatic and medicinal plant in China. Here, the complete chloroplast genome of a wild-type gardenia adapted to island climate was assembled. The assembled genome was 155,247 bp in length, with four typical regions, i.e., a large single-copy (LSC) region (85,414 bp), a small single-copy (SSC) region (18,235 bp) and two inverted repeats (IRs) regions (25,799 bp each). In total, 138 genes were predicted, including 90 protein-coding genes, 40 tRNA genes and eight rRNA genes. The overall GC content of the chloroplast genome was 37.5%. The chloroplast genome would provide more information for the phylogeography and phylogeny study of G. jasminoides.http://dx.doi.org/10.1080/23802359.2020.1861997gardenia jasminoideschloroplast genomephylogenetic analyses |
| spellingShingle | Min Zhang Wan-Dong Chen Yuan-Yuan Li Cheng Zhang Zi-Han Chai Yong-Fu Li Shang-Wei Xie Shao-Yong Deng Yi-Fan Duan Xian-Rong Wang Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate Mitochondrial DNA. Part B. Resources gardenia jasminoides chloroplast genome phylogenetic analyses |
| title | Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate |
| title_full | Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate |
| title_fullStr | Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate |
| title_full_unstemmed | Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate |
| title_short | Complete chloroplast genome of a wild-type Gardenia jasminoides ellis (rubiaceae) adapted to island climate |
| title_sort | complete chloroplast genome of a wild type gardenia jasminoides ellis rubiaceae adapted to island climate |
| topic | gardenia jasminoides chloroplast genome phylogenetic analyses |
| url | http://dx.doi.org/10.1080/23802359.2020.1861997 |
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