Chloroplast genome structure and phylogenetic analysis of Glycosmis parviflora (Sims) Little 1948, a folk medicinal plant featured in Lingnan Region, China
Glycosmis parviflora is the most widely spread and the most morphologically varied species of Chinese Glycosmis, and its roots and leaves serve as folk medicines. We sequenced the complete chloroplast (cp) genome of G. parviflora. The cp genome obtained was a circular DNA molecule of 159,825 bp in l...
| Main Authors: | , , , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2022-06-01
|
| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2022.2087562 |
| _version_ | 1797638560101171200 |
|---|---|
| author | Aimin Chen Fang Li Xuena Xie Rong Huang Enwei Tian Zhi Chao |
| author_facet | Aimin Chen Fang Li Xuena Xie Rong Huang Enwei Tian Zhi Chao |
| author_sort | Aimin Chen |
| collection | DOAJ |
| description | Glycosmis parviflora is the most widely spread and the most morphologically varied species of Chinese Glycosmis, and its roots and leaves serve as folk medicines. We sequenced the complete chloroplast (cp) genome of G. parviflora. The cp genome obtained was a circular DNA molecule of 159,825 bp in length, containing one large and one small single copy region (LSC and SSC) of 87,517 and 18,352 bp separated by a pair of 26,978 bp inverted repeat regions (IRs). The overall GC content of the cp genome was 38.40%. The phylogenetic analysis revealed that Glycosmis was strongly supported as a monophyletic group belonging to Clauseneae, and G. parviflora was closely related to G. pentaphylla. The results will provide the basis for the further study of molecular markers and phylogeny of G. parviflora. |
| first_indexed | 2024-03-11T13:05:19Z |
| format | Article |
| id | doaj.art-2ed14e225195461887a1fce9a2dad588 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:05:19Z |
| publishDate | 2022-06-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-2ed14e225195461887a1fce9a2dad5882023-11-03T14:36:04ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-06-01761160116210.1080/23802359.2022.20875622087562Chloroplast genome structure and phylogenetic analysis of Glycosmis parviflora (Sims) Little 1948, a folk medicinal plant featured in Lingnan Region, ChinaAimin Chen0Fang Li1Xuena Xie2Rong Huang3Enwei Tian4Zhi Chao5Department of Pharmacy, Zhujiang Hospital, Southern Medical UniversityFaculty of Medicinal Plants and Pharmacognosy, School of Traditional Chinese Medicine, Southern Medical UniversityFaculty of Medicinal Plants and Pharmacognosy, School of Traditional Chinese Medicine, Southern Medical UniversityFaculty of Medicinal Plants and Pharmacognosy, School of Traditional Chinese Medicine, Southern Medical UniversityFaculty of Medicinal Plants and Pharmacognosy, School of Traditional Chinese Medicine, Southern Medical UniversityDepartment of Pharmacy, Zhujiang Hospital, Southern Medical UniversityGlycosmis parviflora is the most widely spread and the most morphologically varied species of Chinese Glycosmis, and its roots and leaves serve as folk medicines. We sequenced the complete chloroplast (cp) genome of G. parviflora. The cp genome obtained was a circular DNA molecule of 159,825 bp in length, containing one large and one small single copy region (LSC and SSC) of 87,517 and 18,352 bp separated by a pair of 26,978 bp inverted repeat regions (IRs). The overall GC content of the cp genome was 38.40%. The phylogenetic analysis revealed that Glycosmis was strongly supported as a monophyletic group belonging to Clauseneae, and G. parviflora was closely related to G. pentaphylla. The results will provide the basis for the further study of molecular markers and phylogeny of G. parviflora.http://dx.doi.org/10.1080/23802359.2022.2087562glycosmis parvifloracomplete chloroplast genomephylogeny |
| spellingShingle | Aimin Chen Fang Li Xuena Xie Rong Huang Enwei Tian Zhi Chao Chloroplast genome structure and phylogenetic analysis of Glycosmis parviflora (Sims) Little 1948, a folk medicinal plant featured in Lingnan Region, China Mitochondrial DNA. Part B. Resources glycosmis parviflora complete chloroplast genome phylogeny |
| title | Chloroplast genome structure and phylogenetic analysis of Glycosmis parviflora (Sims) Little 1948, a folk medicinal plant featured in Lingnan Region, China |
| title_full | Chloroplast genome structure and phylogenetic analysis of Glycosmis parviflora (Sims) Little 1948, a folk medicinal plant featured in Lingnan Region, China |
| title_fullStr | Chloroplast genome structure and phylogenetic analysis of Glycosmis parviflora (Sims) Little 1948, a folk medicinal plant featured in Lingnan Region, China |
| title_full_unstemmed | Chloroplast genome structure and phylogenetic analysis of Glycosmis parviflora (Sims) Little 1948, a folk medicinal plant featured in Lingnan Region, China |
| title_short | Chloroplast genome structure and phylogenetic analysis of Glycosmis parviflora (Sims) Little 1948, a folk medicinal plant featured in Lingnan Region, China |
| title_sort | chloroplast genome structure and phylogenetic analysis of glycosmis parviflora sims little 1948 a folk medicinal plant featured in lingnan region china |
| topic | glycosmis parviflora complete chloroplast genome phylogeny |
| url | http://dx.doi.org/10.1080/23802359.2022.2087562 |
| work_keys_str_mv | AT aiminchen chloroplastgenomestructureandphylogeneticanalysisofglycosmisparviflorasimslittle1948afolkmedicinalplantfeaturedinlingnanregionchina AT fangli chloroplastgenomestructureandphylogeneticanalysisofglycosmisparviflorasimslittle1948afolkmedicinalplantfeaturedinlingnanregionchina AT xuenaxie chloroplastgenomestructureandphylogeneticanalysisofglycosmisparviflorasimslittle1948afolkmedicinalplantfeaturedinlingnanregionchina AT ronghuang chloroplastgenomestructureandphylogeneticanalysisofglycosmisparviflorasimslittle1948afolkmedicinalplantfeaturedinlingnanregionchina AT enweitian chloroplastgenomestructureandphylogeneticanalysisofglycosmisparviflorasimslittle1948afolkmedicinalplantfeaturedinlingnanregionchina AT zhichao chloroplastgenomestructureandphylogeneticanalysisofglycosmisparviflorasimslittle1948afolkmedicinalplantfeaturedinlingnanregionchina |