A probiotic bi-functional peptidoglycan hydrolase sheds NOD2 ligands to regulate gut homeostasis in female mice

Abstract Secreted proteins are one of the direct molecular mechanisms by which microbiota influence the host, thus constituting a promising field for drug discovery. Here, through bioinformatics-guided screening of the secretome of clinically established probiotics from Lactobacillus, we identify an...

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Main Authors: Jie Gao, Lei Wang, Jing Jiang, Qian Xu, Nianyi Zeng, Bingyun Lu, Peibo Yuan, Kai Sun, Hongwei Zhou, Xiaolong He
Format: Article
Language:English
Published: Nature Portfolio 2023-06-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-023-38950-3
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author Jie Gao
Lei Wang
Jing Jiang
Qian Xu
Nianyi Zeng
Bingyun Lu
Peibo Yuan
Kai Sun
Hongwei Zhou
Xiaolong He
author_facet Jie Gao
Lei Wang
Jing Jiang
Qian Xu
Nianyi Zeng
Bingyun Lu
Peibo Yuan
Kai Sun
Hongwei Zhou
Xiaolong He
author_sort Jie Gao
collection DOAJ
description Abstract Secreted proteins are one of the direct molecular mechanisms by which microbiota influence the host, thus constituting a promising field for drug discovery. Here, through bioinformatics-guided screening of the secretome of clinically established probiotics from Lactobacillus, we identify an uncharacterized secreted protein (named LPH here) that is shared by most of these probiotic strains (8/10) and demonstrate that it protects female mice from colitis in multiple models. Functional studies show that LPH is a bi-functional peptidoglycan hydrolase with both N-Acetyl-β-D-muramidase and DL-endopeptidase activities that can generate muramyl dipeptide (MDP), a NOD2 ligand. Different active site mutants of LPH in combination with Nod2 knockout female mice confirm that LPH exerts anti-colitis effects through MDP-NOD2 signaling. Furthermore, we validate that LPH can also exert protective effects on inflammation-associated colorectal cancer in female mice. Our study reports a probiotic enzyme that enhances NOD2 signaling in vivo in female mice and describes a molecular mechanism that may contribute to the effects of traditional Lactobacillus probiotics.
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spelling doaj.art-2f72afde1acb4685bd9c355ec67649a12023-06-11T11:17:54ZengNature PortfolioNature Communications2041-17232023-06-0114111510.1038/s41467-023-38950-3A probiotic bi-functional peptidoglycan hydrolase sheds NOD2 ligands to regulate gut homeostasis in female miceJie Gao0Lei Wang1Jing Jiang2Qian Xu3Nianyi Zeng4Bingyun Lu5Peibo Yuan6Kai Sun7Hongwei Zhou8Xiaolong He9Microbiome Medicine Center, Department of Laboratory Medicine, Zhujiang Hospital, Southern Medical UniversityMicrobiome Medicine Center, Department of Laboratory Medicine, Zhujiang Hospital, Southern Medical UniversityDepartment Gerontology, Sichuan Academy of Medical Sciences & Sichuan Provincial People’s HospitalMicrobiome Medicine Center, Department of Laboratory Medicine, Zhujiang Hospital, Southern Medical UniversityMicrobiome Medicine Center, Department of Laboratory Medicine, Zhujiang Hospital, Southern Medical UniversityDepartment of Gastroenterology, Shenzhen Hospital, Southern Medical UniversityMicrobiome Medicine Center, Department of Laboratory Medicine, Zhujiang Hospital, Southern Medical UniversityDepartment of General Surgery, Nanfang Hospital, Southern Medical UniversityMicrobiome Medicine Center, Department of Laboratory Medicine, Zhujiang Hospital, Southern Medical UniversityMicrobiome Medicine Center, Department of Laboratory Medicine, Zhujiang Hospital, Southern Medical UniversityAbstract Secreted proteins are one of the direct molecular mechanisms by which microbiota influence the host, thus constituting a promising field for drug discovery. Here, through bioinformatics-guided screening of the secretome of clinically established probiotics from Lactobacillus, we identify an uncharacterized secreted protein (named LPH here) that is shared by most of these probiotic strains (8/10) and demonstrate that it protects female mice from colitis in multiple models. Functional studies show that LPH is a bi-functional peptidoglycan hydrolase with both N-Acetyl-β-D-muramidase and DL-endopeptidase activities that can generate muramyl dipeptide (MDP), a NOD2 ligand. Different active site mutants of LPH in combination with Nod2 knockout female mice confirm that LPH exerts anti-colitis effects through MDP-NOD2 signaling. Furthermore, we validate that LPH can also exert protective effects on inflammation-associated colorectal cancer in female mice. Our study reports a probiotic enzyme that enhances NOD2 signaling in vivo in female mice and describes a molecular mechanism that may contribute to the effects of traditional Lactobacillus probiotics.https://doi.org/10.1038/s41467-023-38950-3
spellingShingle Jie Gao
Lei Wang
Jing Jiang
Qian Xu
Nianyi Zeng
Bingyun Lu
Peibo Yuan
Kai Sun
Hongwei Zhou
Xiaolong He
A probiotic bi-functional peptidoglycan hydrolase sheds NOD2 ligands to regulate gut homeostasis in female mice
Nature Communications
title A probiotic bi-functional peptidoglycan hydrolase sheds NOD2 ligands to regulate gut homeostasis in female mice
title_full A probiotic bi-functional peptidoglycan hydrolase sheds NOD2 ligands to regulate gut homeostasis in female mice
title_fullStr A probiotic bi-functional peptidoglycan hydrolase sheds NOD2 ligands to regulate gut homeostasis in female mice
title_full_unstemmed A probiotic bi-functional peptidoglycan hydrolase sheds NOD2 ligands to regulate gut homeostasis in female mice
title_short A probiotic bi-functional peptidoglycan hydrolase sheds NOD2 ligands to regulate gut homeostasis in female mice
title_sort probiotic bi functional peptidoglycan hydrolase sheds nod2 ligands to regulate gut homeostasis in female mice
url https://doi.org/10.1038/s41467-023-38950-3
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