The <i>CDPK</i> Gene Family in Mustard (<i>Brassica juncea</i> L.): Genome-Wide Identification and Expression Analysis under Cold Stress

The <i>CDPK</i> family genes play crucial roles in signal transduction pathways during plant development and stress response. In this study, we comprehensively analyzed the <i>CDPK</i> family genes in mustard (<i>Brassica juncea</i> L.), resulting in the identific...

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Bibliographic Details
Main Authors: Haibo Li, Hao Wu, Weifeng Huang, Jiaxian Liu, Jiaxin Deng, Chuanhong Li, Cui Mao, Yang Zhang, Yukun Wang, Jie Zheng
Format: Article
Language:English
Published: MDPI AG 2023-12-01
Series:Horticulturae
Subjects:
Online Access:https://www.mdpi.com/2311-7524/10/1/20
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Summary:The <i>CDPK</i> family genes play crucial roles in signal transduction pathways during plant development and stress response. In this study, we comprehensively analyzed the <i>CDPK</i> family genes in mustard (<i>Brassica juncea</i> L.), resulting in the identification of 101 genes (<i>BjuCDPK1</i>–<i>101</i>) located on chromosomes AA_Chr01 to BB_Chr08. RNA-seq analysis showed that most <i>BjuCDPK</i> genes were predominantly expressed in the root and flower bud, suggesting their organ-specific expression patterns. Furthermore, the expression levels of most <i>BjuCDPK</i> genes were significantly altered by cold stress. The promoter regions of <i>BjuCDPK</i> genes had abundant cis-acting elements related to hormones and stress. The interaction network analysis predicted that BjuCDPK proteins respond to abiotic stress probably via interaction with ABF1, ABF4, and/or DI19. Our findings provide valuable information for further the investigation of the cold stress adaption of mustard via the CDPK signaling pathway.
ISSN:2311-7524