The association of functional polymorphisms in genes expressed in endothelial cells and smooth muscle cells with the myocardial infarction
Abstract Background The association of platelet endothelial cell adhesion molecule 1 (PECAM1), hypoxia-inducible factor 1 subunit alpha (HIF1A), and KIAA1462 in myocardial infarction (MI) was investigated. The study included 401 Han Chinese MI patients and 409 controls. Three tag single-nucleotide p...
| Main Authors: | , , , , , |
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| Format: | Article |
| Language: | English |
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BMC
2019-01-01
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| Series: | Human Genomics |
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| Online Access: | http://link.springer.com/article/10.1186/s40246-018-0189-8 |
| _version_ | 1828272509273767936 |
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| author | Yilan Li Shipeng Wang Dandan Zhang Xueming Xu Bo Yu Yao Zhang |
| author_facet | Yilan Li Shipeng Wang Dandan Zhang Xueming Xu Bo Yu Yao Zhang |
| author_sort | Yilan Li |
| collection | DOAJ |
| description | Abstract Background The association of platelet endothelial cell adhesion molecule 1 (PECAM1), hypoxia-inducible factor 1 subunit alpha (HIF1A), and KIAA1462 in myocardial infarction (MI) was investigated. The study included 401 Han Chinese MI patients and 409 controls. Three tag single-nucleotide polymorphisms (SNPs)—PECAM1 rs1867624, HIF1A rs2057482, and KIAA1462 rs3739998—were selected. SNP genotyping was performed by an improved multiplex ligation detection reaction assay. A systematic review and meta-analysis of studies including 3314 cases and 2687 controls on the association of 5 HIF1A SNPs and the overall risk of MI or coronary artery disease (CAD) was performed. Results The rs1867624 variants were associated with high TG concentrations (p = 0.040) and the rs2057482 variants were associated with decreased HDL-C in MI patients compared with the control group (p = 0.003). Rs2057482 SNP interacted with age to influence TC levels. The SNP of rs3739998 interacted with sex and hypertension to modulate CRE and TG levels, respectively (p < 3.04E-5-0.002). No association between the three SNPs and susceptibility to MI was found (p > 0.05 for all). In the meta-analysis of HIF1A, the rs11549465 C > T and rs10873142 T > C polymorphisms, but not rs2057482, rs11549467, and rs41508050, were correlated with overall MI or CAD risk. Conclusions Taken together, this study provides additional evidence that genetic variation of the PECAM1 rs1867624 and HIF1A rs2057482 can mediate lipid levels in MI patients. |
| first_indexed | 2024-04-13T06:07:46Z |
| format | Article |
| id | doaj.art-335aca4141134d0ba3274e4a286d8d2e |
| institution | Directory Open Access Journal |
| issn | 1479-7364 |
| language | English |
| last_indexed | 2024-04-13T06:07:46Z |
| publishDate | 2019-01-01 |
| publisher | BMC |
| record_format | Article |
| series | Human Genomics |
| spelling | doaj.art-335aca4141134d0ba3274e4a286d8d2e2022-12-22T02:59:11ZengBMCHuman Genomics1479-73642019-01-0113111010.1186/s40246-018-0189-8The association of functional polymorphisms in genes expressed in endothelial cells and smooth muscle cells with the myocardial infarctionYilan Li0Shipeng Wang1Dandan Zhang2Xueming Xu3Bo Yu4Yao Zhang5Department of Cardiology, the 2nd Affiliated Hospital of Harbin Medical UniversityDepartment of Cardiology, the 2nd Affiliated Hospital of Harbin Medical UniversityDepartment of Cardiology, the 2nd Affiliated Hospital of Harbin Medical UniversityDepartment of Cardiology, the 2nd Affiliated Hospital of Harbin Medical UniversityDepartment of Cardiology, the 2nd Affiliated Hospital of Harbin Medical UniversityDepartment of Cardiology, the 2nd Affiliated Hospital of Harbin Medical UniversityAbstract Background The association of platelet endothelial cell adhesion molecule 1 (PECAM1), hypoxia-inducible factor 1 subunit alpha (HIF1A), and KIAA1462 in myocardial infarction (MI) was investigated. The study included 401 Han Chinese MI patients and 409 controls. Three tag single-nucleotide polymorphisms (SNPs)—PECAM1 rs1867624, HIF1A rs2057482, and KIAA1462 rs3739998—were selected. SNP genotyping was performed by an improved multiplex ligation detection reaction assay. A systematic review and meta-analysis of studies including 3314 cases and 2687 controls on the association of 5 HIF1A SNPs and the overall risk of MI or coronary artery disease (CAD) was performed. Results The rs1867624 variants were associated with high TG concentrations (p = 0.040) and the rs2057482 variants were associated with decreased HDL-C in MI patients compared with the control group (p = 0.003). Rs2057482 SNP interacted with age to influence TC levels. The SNP of rs3739998 interacted with sex and hypertension to modulate CRE and TG levels, respectively (p < 3.04E-5-0.002). No association between the three SNPs and susceptibility to MI was found (p > 0.05 for all). In the meta-analysis of HIF1A, the rs11549465 C > T and rs10873142 T > C polymorphisms, but not rs2057482, rs11549467, and rs41508050, were correlated with overall MI or CAD risk. Conclusions Taken together, this study provides additional evidence that genetic variation of the PECAM1 rs1867624 and HIF1A rs2057482 can mediate lipid levels in MI patients.http://link.springer.com/article/10.1186/s40246-018-0189-8PECAM1HIF1AKIAA1462Single-nucleotide polymorphismMyocardial infarctionCoronary artery disease |
| spellingShingle | Yilan Li Shipeng Wang Dandan Zhang Xueming Xu Bo Yu Yao Zhang The association of functional polymorphisms in genes expressed in endothelial cells and smooth muscle cells with the myocardial infarction Human Genomics PECAM1 HIF1A KIAA1462 Single-nucleotide polymorphism Myocardial infarction Coronary artery disease |
| title | The association of functional polymorphisms in genes expressed in endothelial cells and smooth muscle cells with the myocardial infarction |
| title_full | The association of functional polymorphisms in genes expressed in endothelial cells and smooth muscle cells with the myocardial infarction |
| title_fullStr | The association of functional polymorphisms in genes expressed in endothelial cells and smooth muscle cells with the myocardial infarction |
| title_full_unstemmed | The association of functional polymorphisms in genes expressed in endothelial cells and smooth muscle cells with the myocardial infarction |
| title_short | The association of functional polymorphisms in genes expressed in endothelial cells and smooth muscle cells with the myocardial infarction |
| title_sort | association of functional polymorphisms in genes expressed in endothelial cells and smooth muscle cells with the myocardial infarction |
| topic | PECAM1 HIF1A KIAA1462 Single-nucleotide polymorphism Myocardial infarction Coronary artery disease |
| url | http://link.springer.com/article/10.1186/s40246-018-0189-8 |
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