Genetic Alterations Predict Long-Term Survival in Ductal Adenocarcinoma of the Pancreatic Head

Background: Survival of patients with adenocarcinoma of the pancreas (PDAC) is poor and has remained almost unchanged over the past decades. The genomic landscape of PDAC has been characterized in recent years. The aim of this study was to identify a genetic profile as a possible predictor of prolon...

Full description

Bibliographic Details
Main Authors: Sami-Alexander Safi, Lena Haeberle, Wolfgang Goering, Verena Keitel, Georg Fluegen, Nikolas Stoecklein, Alexander Rehders, Wolfram Trudo Knoefel, Irene Esposito
Format: Article
Language:English
Published: MDPI AG 2022-02-01
Series:Cancers
Subjects:
Online Access:https://www.mdpi.com/2072-6694/14/3/850
_version_ 1797488566164520960
author Sami-Alexander Safi
Lena Haeberle
Wolfgang Goering
Verena Keitel
Georg Fluegen
Nikolas Stoecklein
Alexander Rehders
Wolfram Trudo Knoefel
Irene Esposito
author_facet Sami-Alexander Safi
Lena Haeberle
Wolfgang Goering
Verena Keitel
Georg Fluegen
Nikolas Stoecklein
Alexander Rehders
Wolfram Trudo Knoefel
Irene Esposito
author_sort Sami-Alexander Safi
collection DOAJ
description Background: Survival of patients with adenocarcinoma of the pancreas (PDAC) is poor and has remained almost unchanged over the past decades. The genomic landscape of PDAC has been characterized in recent years. The aim of this study was to identify a genetic profile as a possible predictor of prolonged survival in order to tailor therapy for PDAC patients. Methods: Panel next generation sequencing (NGS) and immunohistochemistry (IHC) were performed on paraffin-embedded tumor tissues from curatively treated PDAC patients. Tumor slides were re-evaluated with a focus on the histomorphology. Patients were subgrouped according to short and long overall (<4 years/>4 years) and disease-free (<2 years/>2 years) survival. Results: Thirty-nine patients were included in the study. Clinicopathological staging variables as well as the histomorphological subgroups were homogenously distributed between short- and long-term overall and disease-free survivors. In survival analysis, patients with the <i>KRAS</i> G12D mutation and patients with <i>TP53</i> nonsense and splice-site mutations had a significantly worse overall survival (OS) and disease-free survival (DFS). Patients with long-term OS and DFS showed no <i>KRAS</i> G12D, no <i>TP53</i> nonsense or splice-site mutations. Rare Q61H/D57N <i>KRAS</i> mutations were only found in long-term survivors. The allele frequency rate of <i>KRAS</i> and <i>TP53</i> mutations in tumor cells was significantly higher in short-term disease-free survivors and overall survivors, respectively. Conclusions: NGS of PDAC revealed significant differences in survival outcome in a patient collective with homogenously distributed clinicopathological variables. Further multi-institutional studies are warranted to identify more long-term survivors to detect genetic differences suitable for targeted therapy.
first_indexed 2024-03-10T00:05:05Z
format Article
id doaj.art-342c191da7864a54a1a7ff9aa4e56b33
institution Directory Open Access Journal
issn 2072-6694
language English
last_indexed 2024-03-10T00:05:05Z
publishDate 2022-02-01
publisher MDPI AG
record_format Article
series Cancers
spelling doaj.art-342c191da7864a54a1a7ff9aa4e56b332023-11-23T16:09:42ZengMDPI AGCancers2072-66942022-02-0114385010.3390/cancers14030850Genetic Alterations Predict Long-Term Survival in Ductal Adenocarcinoma of the Pancreatic HeadSami-Alexander Safi0Lena Haeberle1Wolfgang Goering2Verena Keitel3Georg Fluegen4Nikolas Stoecklein5Alexander Rehders6Wolfram Trudo Knoefel7Irene Esposito8Department of Surgery (A), Medical Faculty, Heinrich-Heine-University and University Hospital Duesseldorf, 40225 Duesseldorf, GermanyInstitute of Pathology, Medical Faculty, Heinrich-Heine-University and University Hospital Duesseldorf, Moorenstr. 5, 40225 Duesseldorf, GermanyInstitute of Pathology, Medical Faculty, Heinrich-Heine-University and University Hospital Duesseldorf, Moorenstr. 5, 40225 Duesseldorf, GermanyDepartment of Gastroenterology, Hepatology and Infectious Diseases, Medical Faculty, Heinrich-Heine-University and University Hospital Duesseldorf, 40225 Duesseldorf, GermanyDepartment of Surgery (A), Medical Faculty, Heinrich-Heine-University and University Hospital Duesseldorf, 40225 Duesseldorf, GermanyDepartment of Surgery (A), Medical Faculty, Heinrich-Heine-University and University Hospital Duesseldorf, 40225 Duesseldorf, GermanyDepartment of Surgery (A), Medical Faculty, Heinrich-Heine-University and University Hospital Duesseldorf, 40225 Duesseldorf, GermanyDepartment of Surgery (A), Medical Faculty, Heinrich-Heine-University and University Hospital Duesseldorf, 40225 Duesseldorf, GermanyInstitute of Pathology, Medical Faculty, Heinrich-Heine-University and University Hospital Duesseldorf, Moorenstr. 5, 40225 Duesseldorf, GermanyBackground: Survival of patients with adenocarcinoma of the pancreas (PDAC) is poor and has remained almost unchanged over the past decades. The genomic landscape of PDAC has been characterized in recent years. The aim of this study was to identify a genetic profile as a possible predictor of prolonged survival in order to tailor therapy for PDAC patients. Methods: Panel next generation sequencing (NGS) and immunohistochemistry (IHC) were performed on paraffin-embedded tumor tissues from curatively treated PDAC patients. Tumor slides were re-evaluated with a focus on the histomorphology. Patients were subgrouped according to short and long overall (<4 years/>4 years) and disease-free (<2 years/>2 years) survival. Results: Thirty-nine patients were included in the study. Clinicopathological staging variables as well as the histomorphological subgroups were homogenously distributed between short- and long-term overall and disease-free survivors. In survival analysis, patients with the <i>KRAS</i> G12D mutation and patients with <i>TP53</i> nonsense and splice-site mutations had a significantly worse overall survival (OS) and disease-free survival (DFS). Patients with long-term OS and DFS showed no <i>KRAS</i> G12D, no <i>TP53</i> nonsense or splice-site mutations. Rare Q61H/D57N <i>KRAS</i> mutations were only found in long-term survivors. The allele frequency rate of <i>KRAS</i> and <i>TP53</i> mutations in tumor cells was significantly higher in short-term disease-free survivors and overall survivors, respectively. Conclusions: NGS of PDAC revealed significant differences in survival outcome in a patient collective with homogenously distributed clinicopathological variables. Further multi-institutional studies are warranted to identify more long-term survivors to detect genetic differences suitable for targeted therapy.https://www.mdpi.com/2072-6694/14/3/850NGSKRASTP53PDACpancreatic cancermutation
spellingShingle Sami-Alexander Safi
Lena Haeberle
Wolfgang Goering
Verena Keitel
Georg Fluegen
Nikolas Stoecklein
Alexander Rehders
Wolfram Trudo Knoefel
Irene Esposito
Genetic Alterations Predict Long-Term Survival in Ductal Adenocarcinoma of the Pancreatic Head
Cancers
NGS
KRAS
TP53
PDAC
pancreatic cancer
mutation
title Genetic Alterations Predict Long-Term Survival in Ductal Adenocarcinoma of the Pancreatic Head
title_full Genetic Alterations Predict Long-Term Survival in Ductal Adenocarcinoma of the Pancreatic Head
title_fullStr Genetic Alterations Predict Long-Term Survival in Ductal Adenocarcinoma of the Pancreatic Head
title_full_unstemmed Genetic Alterations Predict Long-Term Survival in Ductal Adenocarcinoma of the Pancreatic Head
title_short Genetic Alterations Predict Long-Term Survival in Ductal Adenocarcinoma of the Pancreatic Head
title_sort genetic alterations predict long term survival in ductal adenocarcinoma of the pancreatic head
topic NGS
KRAS
TP53
PDAC
pancreatic cancer
mutation
url https://www.mdpi.com/2072-6694/14/3/850
work_keys_str_mv AT samialexandersafi geneticalterationspredictlongtermsurvivalinductaladenocarcinomaofthepancreatichead
AT lenahaeberle geneticalterationspredictlongtermsurvivalinductaladenocarcinomaofthepancreatichead
AT wolfganggoering geneticalterationspredictlongtermsurvivalinductaladenocarcinomaofthepancreatichead
AT verenakeitel geneticalterationspredictlongtermsurvivalinductaladenocarcinomaofthepancreatichead
AT georgfluegen geneticalterationspredictlongtermsurvivalinductaladenocarcinomaofthepancreatichead
AT nikolasstoecklein geneticalterationspredictlongtermsurvivalinductaladenocarcinomaofthepancreatichead
AT alexanderrehders geneticalterationspredictlongtermsurvivalinductaladenocarcinomaofthepancreatichead
AT wolframtrudoknoefel geneticalterationspredictlongtermsurvivalinductaladenocarcinomaofthepancreatichead
AT ireneesposito geneticalterationspredictlongtermsurvivalinductaladenocarcinomaofthepancreatichead