Zinc-Finger Nucleases Induced by HIV-1 Tat Excise HIV-1 from the Host Genome in Infected and Latently Infected Cells

Highly active anti-retroviral therapy (HAART) cannot clear infected cells harboring HIV-1 proviral DNA from HIV-1-infected patients. We previously demonstrated that zinc-finger nucleases (ZFNs) can specifically and efficiently excise HIV-1 proviral DNA from latently infected human T cells by targeti...

Full description

Bibliographic Details
Main Authors: Haiyan Ji, Panpan Lu, Baochi Liu, Xiying Qu, Yanan Wang, Zhengtao Jiang, Xinyi Yang, Yangcheng Zhong, He Yang, Hanyu Pan, Lin Zhao, Jianqing Xu, Hongzhou Lu, Huanzhang Zhu
Format: Article
Language:English
Published: Elsevier 2018-09-01
Series:Molecular Therapy: Nucleic Acids
Online Access:http://www.sciencedirect.com/science/article/pii/S216225311830088X
_version_ 1818527552173506560
author Haiyan Ji
Panpan Lu
Baochi Liu
Xiying Qu
Yanan Wang
Zhengtao Jiang
Xinyi Yang
Yangcheng Zhong
He Yang
Hanyu Pan
Lin Zhao
Jianqing Xu
Hongzhou Lu
Huanzhang Zhu
author_facet Haiyan Ji
Panpan Lu
Baochi Liu
Xiying Qu
Yanan Wang
Zhengtao Jiang
Xinyi Yang
Yangcheng Zhong
He Yang
Hanyu Pan
Lin Zhao
Jianqing Xu
Hongzhou Lu
Huanzhang Zhu
author_sort Haiyan Ji
collection DOAJ
description Highly active anti-retroviral therapy (HAART) cannot clear infected cells harboring HIV-1 proviral DNA from HIV-1-infected patients. We previously demonstrated that zinc-finger nucleases (ZFNs) can specifically and efficiently excise HIV-1 proviral DNA from latently infected human T cells by targeting long terminal repeats (LTRs), a novel and alternative antiretroviral strategy for eradicating HIV-1 infection. To prevent unwanted off-target effects from constantly expressed ZFNs, in this study, we engineered the expression of ZFNs under the control of HIV-1 LTR, by which ZFN expression can be activated by the HIV-1 (Trans-Activator of Transcription) Tat protein. Our results show that functional expression of ZFNs induced by Tat excise the integrated proviral DNA of HIV-NL4-3-eGFP in approximately 30% of the population of HIV-1-infected cells. The results from HIV-1-infected human primary T cells and latently infected T cells treated with the inducible ZFNs further validated that proviral DNA can be excised. Taken together, positively regulated expression of ZFNs in the presence of HIV-1 Tat may provide a safer and novel implementation of genome-editing technology for eradicating HIV-1 proviral DNA from infected host cells. Keywords: zinc-finger nuclease, genome editing, genomic excision, inducible, Tat, HIV-1, gene therapy
first_indexed 2024-12-11T06:37:35Z
format Article
id doaj.art-3492fa03c2d042ff8838feef759b40c0
institution Directory Open Access Journal
issn 2162-2531
language English
last_indexed 2024-12-11T06:37:35Z
publishDate 2018-09-01
publisher Elsevier
record_format Article
series Molecular Therapy: Nucleic Acids
spelling doaj.art-3492fa03c2d042ff8838feef759b40c02022-12-22T01:17:20ZengElsevierMolecular Therapy: Nucleic Acids2162-25312018-09-01126774Zinc-Finger Nucleases Induced by HIV-1 Tat Excise HIV-1 from the Host Genome in Infected and Latently Infected CellsHaiyan Ji0Panpan Lu1Baochi Liu2Xiying Qu3Yanan Wang4Zhengtao Jiang5Xinyi Yang6Yangcheng Zhong7He Yang8Hanyu Pan9Lin Zhao10Jianqing Xu11Hongzhou Lu12Huanzhang Zhu13State Key Laboratory of Genetic Engineering and Key Laboratory of Medical Molecular Virology of the Ministry of Education/Health, Gene & Cell Therapy Research Center, School of Life Sciences, Fudan University, Shanghai 200438, ChinaState Key Laboratory of Genetic Engineering and Key Laboratory of Medical Molecular Virology of the Ministry of Education/Health, Gene & Cell Therapy Research Center, School of Life Sciences, Fudan University, Shanghai 200438, ChinaShanghai Public Health Clinical Center, Fudan University, Shanghai 200433, ChinaState Key Laboratory of Genetic Engineering and Key Laboratory of Medical Molecular Virology of the Ministry of Education/Health, Gene & Cell Therapy Research Center, School of Life Sciences, Fudan University, Shanghai 200438, ChinaState Key Laboratory of Genetic Engineering and Key Laboratory of Medical Molecular Virology of the Ministry of Education/Health, Gene & Cell Therapy Research Center, School of Life Sciences, Fudan University, Shanghai 200438, ChinaState Key Laboratory of Genetic Engineering and Key Laboratory of Medical Molecular Virology of the Ministry of Education/Health, Gene & Cell Therapy Research Center, School of Life Sciences, Fudan University, Shanghai 200438, ChinaState Key Laboratory of Genetic Engineering and Key Laboratory of Medical Molecular Virology of the Ministry of Education/Health, Gene & Cell Therapy Research Center, School of Life Sciences, Fudan University, Shanghai 200438, ChinaState Key Laboratory of Genetic Engineering and Key Laboratory of Medical Molecular Virology of the Ministry of Education/Health, Gene & Cell Therapy Research Center, School of Life Sciences, Fudan University, Shanghai 200438, ChinaState Key Laboratory of Genetic Engineering and Key Laboratory of Medical Molecular Virology of the Ministry of Education/Health, Gene & Cell Therapy Research Center, School of Life Sciences, Fudan University, Shanghai 200438, ChinaState Key Laboratory of Genetic Engineering and Key Laboratory of Medical Molecular Virology of the Ministry of Education/Health, Gene & Cell Therapy Research Center, School of Life Sciences, Fudan University, Shanghai 200438, ChinaState Key Laboratory of Genetic Engineering and Key Laboratory of Medical Molecular Virology of the Ministry of Education/Health, Gene & Cell Therapy Research Center, School of Life Sciences, Fudan University, Shanghai 200438, ChinaShanghai Public Health Clinical Center, Fudan University, Shanghai 200433, ChinaShanghai Public Health Clinical Center, Fudan University, Shanghai 200433, ChinaState Key Laboratory of Genetic Engineering and Key Laboratory of Medical Molecular Virology of the Ministry of Education/Health, Gene & Cell Therapy Research Center, School of Life Sciences, Fudan University, Shanghai 200438, China; Corresponding author: Huanzhang Zhu, State Key Laboratory of Genetic Engineering and Key Laboratory of Medical Molecular Virology of the Ministry of Education/Health, Center of Gene Therapy, School of Life Sciences, Fudan University, Shanghai 200438, China.Highly active anti-retroviral therapy (HAART) cannot clear infected cells harboring HIV-1 proviral DNA from HIV-1-infected patients. We previously demonstrated that zinc-finger nucleases (ZFNs) can specifically and efficiently excise HIV-1 proviral DNA from latently infected human T cells by targeting long terminal repeats (LTRs), a novel and alternative antiretroviral strategy for eradicating HIV-1 infection. To prevent unwanted off-target effects from constantly expressed ZFNs, in this study, we engineered the expression of ZFNs under the control of HIV-1 LTR, by which ZFN expression can be activated by the HIV-1 (Trans-Activator of Transcription) Tat protein. Our results show that functional expression of ZFNs induced by Tat excise the integrated proviral DNA of HIV-NL4-3-eGFP in approximately 30% of the population of HIV-1-infected cells. The results from HIV-1-infected human primary T cells and latently infected T cells treated with the inducible ZFNs further validated that proviral DNA can be excised. Taken together, positively regulated expression of ZFNs in the presence of HIV-1 Tat may provide a safer and novel implementation of genome-editing technology for eradicating HIV-1 proviral DNA from infected host cells. Keywords: zinc-finger nuclease, genome editing, genomic excision, inducible, Tat, HIV-1, gene therapyhttp://www.sciencedirect.com/science/article/pii/S216225311830088X
spellingShingle Haiyan Ji
Panpan Lu
Baochi Liu
Xiying Qu
Yanan Wang
Zhengtao Jiang
Xinyi Yang
Yangcheng Zhong
He Yang
Hanyu Pan
Lin Zhao
Jianqing Xu
Hongzhou Lu
Huanzhang Zhu
Zinc-Finger Nucleases Induced by HIV-1 Tat Excise HIV-1 from the Host Genome in Infected and Latently Infected Cells
Molecular Therapy: Nucleic Acids
title Zinc-Finger Nucleases Induced by HIV-1 Tat Excise HIV-1 from the Host Genome in Infected and Latently Infected Cells
title_full Zinc-Finger Nucleases Induced by HIV-1 Tat Excise HIV-1 from the Host Genome in Infected and Latently Infected Cells
title_fullStr Zinc-Finger Nucleases Induced by HIV-1 Tat Excise HIV-1 from the Host Genome in Infected and Latently Infected Cells
title_full_unstemmed Zinc-Finger Nucleases Induced by HIV-1 Tat Excise HIV-1 from the Host Genome in Infected and Latently Infected Cells
title_short Zinc-Finger Nucleases Induced by HIV-1 Tat Excise HIV-1 from the Host Genome in Infected and Latently Infected Cells
title_sort zinc finger nucleases induced by hiv 1 tat excise hiv 1 from the host genome in infected and latently infected cells
url http://www.sciencedirect.com/science/article/pii/S216225311830088X
work_keys_str_mv AT haiyanji zincfingernucleasesinducedbyhiv1tatexcisehiv1fromthehostgenomeininfectedandlatentlyinfectedcells
AT panpanlu zincfingernucleasesinducedbyhiv1tatexcisehiv1fromthehostgenomeininfectedandlatentlyinfectedcells
AT baochiliu zincfingernucleasesinducedbyhiv1tatexcisehiv1fromthehostgenomeininfectedandlatentlyinfectedcells
AT xiyingqu zincfingernucleasesinducedbyhiv1tatexcisehiv1fromthehostgenomeininfectedandlatentlyinfectedcells
AT yananwang zincfingernucleasesinducedbyhiv1tatexcisehiv1fromthehostgenomeininfectedandlatentlyinfectedcells
AT zhengtaojiang zincfingernucleasesinducedbyhiv1tatexcisehiv1fromthehostgenomeininfectedandlatentlyinfectedcells
AT xinyiyang zincfingernucleasesinducedbyhiv1tatexcisehiv1fromthehostgenomeininfectedandlatentlyinfectedcells
AT yangchengzhong zincfingernucleasesinducedbyhiv1tatexcisehiv1fromthehostgenomeininfectedandlatentlyinfectedcells
AT heyang zincfingernucleasesinducedbyhiv1tatexcisehiv1fromthehostgenomeininfectedandlatentlyinfectedcells
AT hanyupan zincfingernucleasesinducedbyhiv1tatexcisehiv1fromthehostgenomeininfectedandlatentlyinfectedcells
AT linzhao zincfingernucleasesinducedbyhiv1tatexcisehiv1fromthehostgenomeininfectedandlatentlyinfectedcells
AT jianqingxu zincfingernucleasesinducedbyhiv1tatexcisehiv1fromthehostgenomeininfectedandlatentlyinfectedcells
AT hongzhoulu zincfingernucleasesinducedbyhiv1tatexcisehiv1fromthehostgenomeininfectedandlatentlyinfectedcells
AT huanzhangzhu zincfingernucleasesinducedbyhiv1tatexcisehiv1fromthehostgenomeininfectedandlatentlyinfectedcells