Identifying promoter sequence architectures via a chunking-based algorithm using non-negative matrix factorisation.

Core promoters are stretches of DNA at the beginning of genes that contain information that facilitates the binding of transcription initiation complexes. Different functional subsets of genes have core promoters with distinct architectures and characteristic motifs. Some of these motifs inform the...

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Bibliographic Details
Main Authors: Sarvesh Nikumbh, Boris Lenhard
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2023-11-01
Series:PLoS Computational Biology
Online Access:https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1011491&type=printable

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