Transcriptome datasets of oil palm pathogen Ganoderma boninense
Ganoderma boninense is known to be the causal agent for basal stem rot (BSR) affecting the oil palm industry worldwide thus cumulating to high economic losses every year. Several reports have shown that a compatible monokaryon pair needs to mate; producing dikaryotic mycelia to initiate the infectio...
| Main Authors: | , , , , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Elsevier
2018-04-01
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| Series: | Data in Brief |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S2352340918301434 |
| _version_ | 1811201832612003840 |
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| author | Irene Liza Isaac A.W.C.Y. Walter Mohd Faizal Abu Bakar A.S. Idris Farah Diba Abu Bakar Izwan Bharudin Abdul Munir Abdul Murad |
| author_facet | Irene Liza Isaac A.W.C.Y. Walter Mohd Faizal Abu Bakar A.S. Idris Farah Diba Abu Bakar Izwan Bharudin Abdul Munir Abdul Murad |
| author_sort | Irene Liza Isaac |
| collection | DOAJ |
| description | Ganoderma boninense is known to be the causal agent for basal stem rot (BSR) affecting the oil palm industry worldwide thus cumulating to high economic losses every year. Several reports have shown that a compatible monokaryon pair needs to mate; producing dikaryotic mycelia to initiate the infection towards the oil palm. However, the molecular events occurs during mating process are not well understood. We performed transcriptome sequencing using Illumina RNA-seq technology and de novo assembly of the transcripts from monokaryon, mating junction and dikaryon mycelia of G. boninense. Raw reads from these three libraries were deposited in the NCBI database with accession number SRR1745787, SRR1745773 and SRR1745777, respectively. |
| first_indexed | 2024-04-12T02:27:34Z |
| format | Article |
| id | doaj.art-34c7cab150494a8385ae56c4090766d4 |
| institution | Directory Open Access Journal |
| issn | 2352-3409 |
| language | English |
| last_indexed | 2024-04-12T02:27:34Z |
| publishDate | 2018-04-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Data in Brief |
| spelling | doaj.art-34c7cab150494a8385ae56c4090766d42022-12-22T03:51:54ZengElsevierData in Brief2352-34092018-04-011711081111Transcriptome datasets of oil palm pathogen Ganoderma boninenseIrene Liza Isaac0A.W.C.Y. Walter1Mohd Faizal Abu Bakar2A.S. Idris3Farah Diba Abu Bakar4Izwan Bharudin5Abdul Munir Abdul Murad6School of Biosciences and Biotechnology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, UKM, Bangi 43600, Selangor, MalaysiaSchool of Biosciences and Biotechnology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, UKM, Bangi 43600, Selangor, MalaysiaMalaysia Genome Institute, Ministry of Science, Technology and Innovation, Jalan Bangi, 43000 Kajang, Selangor, MalaysiaMalaysian Palm Oil Board (MPOB), Persiaran Institusi, Bandar Baru Bangi, 43000 Kajang, Selangor, MalaysiaSchool of Biosciences and Biotechnology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, UKM, Bangi 43600, Selangor, MalaysiaSchool of Biosciences and Biotechnology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, UKM, Bangi 43600, Selangor, Malaysia; Corresponding author.School of Biosciences and Biotechnology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, UKM, Bangi 43600, Selangor, MalaysiaGanoderma boninense is known to be the causal agent for basal stem rot (BSR) affecting the oil palm industry worldwide thus cumulating to high economic losses every year. Several reports have shown that a compatible monokaryon pair needs to mate; producing dikaryotic mycelia to initiate the infection towards the oil palm. However, the molecular events occurs during mating process are not well understood. We performed transcriptome sequencing using Illumina RNA-seq technology and de novo assembly of the transcripts from monokaryon, mating junction and dikaryon mycelia of G. boninense. Raw reads from these three libraries were deposited in the NCBI database with accession number SRR1745787, SRR1745773 and SRR1745777, respectively.http://www.sciencedirect.com/science/article/pii/S2352340918301434 |
| spellingShingle | Irene Liza Isaac A.W.C.Y. Walter Mohd Faizal Abu Bakar A.S. Idris Farah Diba Abu Bakar Izwan Bharudin Abdul Munir Abdul Murad Transcriptome datasets of oil palm pathogen Ganoderma boninense Data in Brief |
| title | Transcriptome datasets of oil palm pathogen Ganoderma boninense |
| title_full | Transcriptome datasets of oil palm pathogen Ganoderma boninense |
| title_fullStr | Transcriptome datasets of oil palm pathogen Ganoderma boninense |
| title_full_unstemmed | Transcriptome datasets of oil palm pathogen Ganoderma boninense |
| title_short | Transcriptome datasets of oil palm pathogen Ganoderma boninense |
| title_sort | transcriptome datasets of oil palm pathogen ganoderma boninense |
| url | http://www.sciencedirect.com/science/article/pii/S2352340918301434 |
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