Bacteria evolve macroscopic multicellularity by the genetic assimilation of phenotypically plastic cell clustering

Abstract The evolutionary transition from unicellularity to multicellularity was a key innovation in the history of life. Experimental evolution is an important tool to study the formation of undifferentiated cellular clusters, the likely first step of this transition. Although multicellularity firs...

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Main Authors: Yashraj Chavhan, Sutirth Dey, Peter A. Lind
Format: Article
Language:English
Published: Nature Portfolio 2023-06-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-023-39320-9
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author Yashraj Chavhan
Sutirth Dey
Peter A. Lind
author_facet Yashraj Chavhan
Sutirth Dey
Peter A. Lind
author_sort Yashraj Chavhan
collection DOAJ
description Abstract The evolutionary transition from unicellularity to multicellularity was a key innovation in the history of life. Experimental evolution is an important tool to study the formation of undifferentiated cellular clusters, the likely first step of this transition. Although multicellularity first evolved in bacteria, previous experimental evolution research has primarily used eukaryotes. Moreover, it focuses on mutationally driven (and not environmentally induced) phenotypes. Here we show that both Gram-negative and Gram-positive bacteria exhibit phenotypically plastic (i.e., environmentally induced) cell clustering. Under high salinity, they form elongated clusters of ~ 2 cm. However, under habitual salinity, the clusters disintegrate and grow planktonically. We used experimental evolution with Escherichia coli to show that such clustering can be assimilated genetically: the evolved bacteria inherently grow as macroscopic multicellular clusters, even without environmental induction. Highly parallel mutations in genes linked to cell wall assembly formed the genomic basis of assimilated multicellularity. While the wildtype also showed cell shape plasticity across high versus low salinity, it was either assimilated or reversed after evolution. Interestingly, a single mutation could genetically assimilate multicellularity by modulating plasticity at multiple levels of organization. Taken together, we show that phenotypic plasticity can prime bacteria for evolving undifferentiated macroscopic multicellularity.
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spelling doaj.art-3572edbb367c46478f9549b96fe3fe532023-06-18T11:18:48ZengNature PortfolioNature Communications2041-17232023-06-0114111210.1038/s41467-023-39320-9Bacteria evolve macroscopic multicellularity by the genetic assimilation of phenotypically plastic cell clusteringYashraj Chavhan0Sutirth Dey1Peter A. Lind2Department of Molecular Biology, Umeå UniversityIndian Institute of Science Education and Research (IISER) PuneDepartment of Molecular Biology, Umeå UniversityAbstract The evolutionary transition from unicellularity to multicellularity was a key innovation in the history of life. Experimental evolution is an important tool to study the formation of undifferentiated cellular clusters, the likely first step of this transition. Although multicellularity first evolved in bacteria, previous experimental evolution research has primarily used eukaryotes. Moreover, it focuses on mutationally driven (and not environmentally induced) phenotypes. Here we show that both Gram-negative and Gram-positive bacteria exhibit phenotypically plastic (i.e., environmentally induced) cell clustering. Under high salinity, they form elongated clusters of ~ 2 cm. However, under habitual salinity, the clusters disintegrate and grow planktonically. We used experimental evolution with Escherichia coli to show that such clustering can be assimilated genetically: the evolved bacteria inherently grow as macroscopic multicellular clusters, even without environmental induction. Highly parallel mutations in genes linked to cell wall assembly formed the genomic basis of assimilated multicellularity. While the wildtype also showed cell shape plasticity across high versus low salinity, it was either assimilated or reversed after evolution. Interestingly, a single mutation could genetically assimilate multicellularity by modulating plasticity at multiple levels of organization. Taken together, we show that phenotypic plasticity can prime bacteria for evolving undifferentiated macroscopic multicellularity.https://doi.org/10.1038/s41467-023-39320-9
spellingShingle Yashraj Chavhan
Sutirth Dey
Peter A. Lind
Bacteria evolve macroscopic multicellularity by the genetic assimilation of phenotypically plastic cell clustering
Nature Communications
title Bacteria evolve macroscopic multicellularity by the genetic assimilation of phenotypically plastic cell clustering
title_full Bacteria evolve macroscopic multicellularity by the genetic assimilation of phenotypically plastic cell clustering
title_fullStr Bacteria evolve macroscopic multicellularity by the genetic assimilation of phenotypically plastic cell clustering
title_full_unstemmed Bacteria evolve macroscopic multicellularity by the genetic assimilation of phenotypically plastic cell clustering
title_short Bacteria evolve macroscopic multicellularity by the genetic assimilation of phenotypically plastic cell clustering
title_sort bacteria evolve macroscopic multicellularity by the genetic assimilation of phenotypically plastic cell clustering
url https://doi.org/10.1038/s41467-023-39320-9
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