Complete mitochondrial genome and phylogenetic analysis of Schizothorax sinensis (Teleostei: Cypriniformes: Cyprinidae)
This study describes the first sequencing of the complete mitochondrial genome of Schizothorax sinensis, a species of cyprinid snowtrout from the Jialing River and Fujiang River basins in China’s Sichuan Province. The total length is 16,571 base pairs. Similar to most Schizothoracinae mitochondrial...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-03-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1901622 |
| _version_ | 1827772502969942016 |
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| author | Deng Chen Changkun Fu Ziyong Lei Yuhao Li Tianmeng Zhao Hailing Fan Tao Hu Qian Wang Hao Zong |
| author_facet | Deng Chen Changkun Fu Ziyong Lei Yuhao Li Tianmeng Zhao Hailing Fan Tao Hu Qian Wang Hao Zong |
| author_sort | Deng Chen |
| collection | DOAJ |
| description | This study describes the first sequencing of the complete mitochondrial genome of Schizothorax sinensis, a species of cyprinid snowtrout from the Jialing River and Fujiang River basins in China’s Sichuan Province. The total length is 16,571 base pairs. Similar to most Schizothoracinae mitochondrial genomes, there are 37 genes including 13 protein coding genes, 22 transfer RNA genes and 2 ribosomal RNA genes. In addition, it contains a control region rich in A-T nucleotides. The overall nucleotide composition is 29.6% for A, 27.1% for C, 17.9% for G and 25.4% for T, and the percentage of GC content is 45.0%. Phylogenetic analysis suggested that Schizothorax sinensis and Schizothorax prenanti clustered together in a clade. This work provides additional molecular information for studying Schizothorax sinensis conservation genetics and evolutionary relationships. |
| first_indexed | 2024-03-11T13:09:27Z |
| format | Article |
| id | doaj.art-3584aeb5b0224afd915f06a6a4501db0 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:09:27Z |
| publishDate | 2021-03-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-3584aeb5b0224afd915f06a6a4501db02023-11-03T14:16:08ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-03-01631118111910.1080/23802359.2021.19016221901622Complete mitochondrial genome and phylogenetic analysis of Schizothorax sinensis (Teleostei: Cypriniformes: Cyprinidae)Deng Chen0Changkun Fu1Ziyong Lei2Yuhao Li3Tianmeng Zhao4Hailing Fan5Tao Hu6Qian Wang7Hao Zong8College of Life Sciences, Sichuan Normal UniversityCollege of Life Sciences, Sichuan Normal UniversityCollege of Life Sciences, Sichuan Normal UniversityCollege of Life Sciences, Sichuan Normal UniversityCollege of Life Sciences, Sichuan Normal UniversityCollege of Life Sciences, Sichuan Normal UniversityCollege of Life Sciences, Sichuan Normal UniversityCollege of Life Sciences, Sichuan Normal UniversityCollege of Life Sciences, Sichuan Normal UniversityThis study describes the first sequencing of the complete mitochondrial genome of Schizothorax sinensis, a species of cyprinid snowtrout from the Jialing River and Fujiang River basins in China’s Sichuan Province. The total length is 16,571 base pairs. Similar to most Schizothoracinae mitochondrial genomes, there are 37 genes including 13 protein coding genes, 22 transfer RNA genes and 2 ribosomal RNA genes. In addition, it contains a control region rich in A-T nucleotides. The overall nucleotide composition is 29.6% for A, 27.1% for C, 17.9% for G and 25.4% for T, and the percentage of GC content is 45.0%. Phylogenetic analysis suggested that Schizothorax sinensis and Schizothorax prenanti clustered together in a clade. This work provides additional molecular information for studying Schizothorax sinensis conservation genetics and evolutionary relationships.http://dx.doi.org/10.1080/23802359.2021.1901622mitochondrial genomeschizothorax sinensisphylogenetic treeschizothoracinae |
| spellingShingle | Deng Chen Changkun Fu Ziyong Lei Yuhao Li Tianmeng Zhao Hailing Fan Tao Hu Qian Wang Hao Zong Complete mitochondrial genome and phylogenetic analysis of Schizothorax sinensis (Teleostei: Cypriniformes: Cyprinidae) Mitochondrial DNA. Part B. Resources mitochondrial genome schizothorax sinensis phylogenetic tree schizothoracinae |
| title | Complete mitochondrial genome and phylogenetic analysis of Schizothorax sinensis (Teleostei: Cypriniformes: Cyprinidae) |
| title_full | Complete mitochondrial genome and phylogenetic analysis of Schizothorax sinensis (Teleostei: Cypriniformes: Cyprinidae) |
| title_fullStr | Complete mitochondrial genome and phylogenetic analysis of Schizothorax sinensis (Teleostei: Cypriniformes: Cyprinidae) |
| title_full_unstemmed | Complete mitochondrial genome and phylogenetic analysis of Schizothorax sinensis (Teleostei: Cypriniformes: Cyprinidae) |
| title_short | Complete mitochondrial genome and phylogenetic analysis of Schizothorax sinensis (Teleostei: Cypriniformes: Cyprinidae) |
| title_sort | complete mitochondrial genome and phylogenetic analysis of schizothorax sinensis teleostei cypriniformes cyprinidae |
| topic | mitochondrial genome schizothorax sinensis phylogenetic tree schizothoracinae |
| url | http://dx.doi.org/10.1080/23802359.2021.1901622 |
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