A Bioinformatics Approach for Detecting Repetitive Nested Motifs using Pattern Matching

The identification of nested motifs in genomic sequences is a complex computational problem. The detection of these patterns is important to allow the discovery of transposable element (TE) insertions, incomplete reverse transcripts, deletions, and/or mutations. In this study, a de novo strategy for...

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Bibliographic Details
Main Authors: José R. Romero, Jessica A. Carballido, Ingrid Garbus, Viviana C. Echenique, Ignacio Ponzoni
Format: Article
Language:English
Published: SAGE Publishing 2016-01-01
Series:Evolutionary Bioinformatics
Online Access:https://doi.org/10.4137/EBO.S40138