Protease-associated import systems are widespread in Gram-negative bacteria.

Bacteria have evolved sophisticated uptake machineries in order to obtain the nutrients required for growth. Gram-negative plant pathogens of the genus Pectobacterium obtain iron from the protein ferredoxin, which is produced by their plant hosts. This iron-piracy is mediated by the ferredoxin uptak...

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Main Authors: Rhys Grinter, Pok Man Leung, Lakshmi C Wijeyewickrema, Dene Littler, Simone Beckham, Robert N Pike, Daniel Walker, Chris Greening, Trevor Lithgow
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2019-10-01
Series:PLoS Genetics
Online Access:https://doi.org/10.1371/journal.pgen.1008435
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author Rhys Grinter
Pok Man Leung
Lakshmi C Wijeyewickrema
Dene Littler
Simone Beckham
Robert N Pike
Daniel Walker
Chris Greening
Trevor Lithgow
author_facet Rhys Grinter
Pok Man Leung
Lakshmi C Wijeyewickrema
Dene Littler
Simone Beckham
Robert N Pike
Daniel Walker
Chris Greening
Trevor Lithgow
author_sort Rhys Grinter
collection DOAJ
description Bacteria have evolved sophisticated uptake machineries in order to obtain the nutrients required for growth. Gram-negative plant pathogens of the genus Pectobacterium obtain iron from the protein ferredoxin, which is produced by their plant hosts. This iron-piracy is mediated by the ferredoxin uptake system (Fus), a gene cluster encoding proteins that transport ferredoxin into the bacterial cell and process it proteolytically. In this work we show that gene clusters related to the Fus are widespread in bacterial species. Through structural and biochemical characterisation of the distantly related Fus homologues YddB and PqqL from Escherichia coli, we show that these proteins are analogous to components of the Fus from Pectobacterium. The membrane protein YddB shares common structural features with the outer membrane ferredoxin transporter FusA, including a large extracellular substrate binding site. PqqL is an active protease with an analogous periplasmic localisation and iron-dependent expression to the ferredoxin processing protease FusC. Structural analysis demonstrates that PqqL and FusC share specific features that distinguish them from other members of the M16 protease family. Taken together, these data provide evidence that protease associated import systems analogous to the Fus are widespread in Gram-negative bacteria.
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spelling doaj.art-368c0a8a4298484d89ac2283aa82291b2022-12-21T23:36:23ZengPublic Library of Science (PLoS)PLoS Genetics1553-73901553-74042019-10-011510e100843510.1371/journal.pgen.1008435Protease-associated import systems are widespread in Gram-negative bacteria.Rhys GrinterPok Man LeungLakshmi C WijeyewickremaDene LittlerSimone BeckhamRobert N PikeDaniel WalkerChris GreeningTrevor LithgowBacteria have evolved sophisticated uptake machineries in order to obtain the nutrients required for growth. Gram-negative plant pathogens of the genus Pectobacterium obtain iron from the protein ferredoxin, which is produced by their plant hosts. This iron-piracy is mediated by the ferredoxin uptake system (Fus), a gene cluster encoding proteins that transport ferredoxin into the bacterial cell and process it proteolytically. In this work we show that gene clusters related to the Fus are widespread in bacterial species. Through structural and biochemical characterisation of the distantly related Fus homologues YddB and PqqL from Escherichia coli, we show that these proteins are analogous to components of the Fus from Pectobacterium. The membrane protein YddB shares common structural features with the outer membrane ferredoxin transporter FusA, including a large extracellular substrate binding site. PqqL is an active protease with an analogous periplasmic localisation and iron-dependent expression to the ferredoxin processing protease FusC. Structural analysis demonstrates that PqqL and FusC share specific features that distinguish them from other members of the M16 protease family. Taken together, these data provide evidence that protease associated import systems analogous to the Fus are widespread in Gram-negative bacteria.https://doi.org/10.1371/journal.pgen.1008435
spellingShingle Rhys Grinter
Pok Man Leung
Lakshmi C Wijeyewickrema
Dene Littler
Simone Beckham
Robert N Pike
Daniel Walker
Chris Greening
Trevor Lithgow
Protease-associated import systems are widespread in Gram-negative bacteria.
PLoS Genetics
title Protease-associated import systems are widespread in Gram-negative bacteria.
title_full Protease-associated import systems are widespread in Gram-negative bacteria.
title_fullStr Protease-associated import systems are widespread in Gram-negative bacteria.
title_full_unstemmed Protease-associated import systems are widespread in Gram-negative bacteria.
title_short Protease-associated import systems are widespread in Gram-negative bacteria.
title_sort protease associated import systems are widespread in gram negative bacteria
url https://doi.org/10.1371/journal.pgen.1008435
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