The complete mitochondrial genome of Stolephorus insularis (Clupeiformes: Engraulidae) and phylogenetic studies of Engraulidae
The complete mitochondrial genome of this species was first determined in this study. We describe the complete mitogenome of Stolephorus insularis in this study. The mitogenome is 16711 nucleotides long and contains 13 protein-coding genes (PCGs), two ribosomal RNA genes, 22 transfer RNA genes, and...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1536470 |
| _version_ | 1797640596791230464 |
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| author | Zan Pang Liqin Liu Bingjian Liu Li Gong Lihua jiang Zhenming Lü |
| author_facet | Zan Pang Liqin Liu Bingjian Liu Li Gong Lihua jiang Zhenming Lü |
| author_sort | Zan Pang |
| collection | DOAJ |
| description | The complete mitochondrial genome of this species was first determined in this study. We describe the complete mitogenome of Stolephorus insularis in this study. The mitogenome is 16711 nucleotides long and contains 13 protein-coding genes (PCGs), two ribosomal RNA genes, 22 transfer RNA genes, and two main non-coding regions. The overall base composition includes A (28.0%), C (26.8%), T (27.8%), and G (17.4%). Furthermore, the 13 PCGs encode 3624 amino acids in total. All the PCGs use the initiation codon ATG except COI uses GTG, most of them have TAA or TAG as the stop codon, except three PCGs (COII, ND4, and Cytb) use an incomplete stop codon T. The phylogenetic tree based on the neighbour-joining method was constructed to provide relationship within Engraulidae, which could be a useful basis for management of this species. |
| first_indexed | 2024-03-11T13:33:18Z |
| format | Article |
| id | doaj.art-36a0b8f10c2844cf92b1978c84378198 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:33:18Z |
| publishDate | 2019-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-36a0b8f10c2844cf92b1978c843781982023-11-02T16:07:22ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-01-014192192210.1080/23802359.2018.15364701536470The complete mitochondrial genome of Stolephorus insularis (Clupeiformes: Engraulidae) and phylogenetic studies of EngraulidaeZan Pang0Liqin Liu1Bingjian Liu2Li Gong3Lihua jiang4Zhenming Lü5Zhejiang Ocean UniversityZhejiang Ocean UniversityZhejiang Ocean UniversityZhejiang Ocean UniversityZhejiang Ocean UniversityZhejiang Ocean UniversityThe complete mitochondrial genome of this species was first determined in this study. We describe the complete mitogenome of Stolephorus insularis in this study. The mitogenome is 16711 nucleotides long and contains 13 protein-coding genes (PCGs), two ribosomal RNA genes, 22 transfer RNA genes, and two main non-coding regions. The overall base composition includes A (28.0%), C (26.8%), T (27.8%), and G (17.4%). Furthermore, the 13 PCGs encode 3624 amino acids in total. All the PCGs use the initiation codon ATG except COI uses GTG, most of them have TAA or TAG as the stop codon, except three PCGs (COII, ND4, and Cytb) use an incomplete stop codon T. The phylogenetic tree based on the neighbour-joining method was constructed to provide relationship within Engraulidae, which could be a useful basis for management of this species.http://dx.doi.org/10.1080/23802359.2018.1536470stolephorus insularismitogenomephylogenetic relationship |
| spellingShingle | Zan Pang Liqin Liu Bingjian Liu Li Gong Lihua jiang Zhenming Lü The complete mitochondrial genome of Stolephorus insularis (Clupeiformes: Engraulidae) and phylogenetic studies of Engraulidae Mitochondrial DNA. Part B. Resources stolephorus insularis mitogenome phylogenetic relationship |
| title | The complete mitochondrial genome of Stolephorus insularis (Clupeiformes: Engraulidae) and phylogenetic studies of Engraulidae |
| title_full | The complete mitochondrial genome of Stolephorus insularis (Clupeiformes: Engraulidae) and phylogenetic studies of Engraulidae |
| title_fullStr | The complete mitochondrial genome of Stolephorus insularis (Clupeiformes: Engraulidae) and phylogenetic studies of Engraulidae |
| title_full_unstemmed | The complete mitochondrial genome of Stolephorus insularis (Clupeiformes: Engraulidae) and phylogenetic studies of Engraulidae |
| title_short | The complete mitochondrial genome of Stolephorus insularis (Clupeiformes: Engraulidae) and phylogenetic studies of Engraulidae |
| title_sort | complete mitochondrial genome of stolephorus insularis clupeiformes engraulidae and phylogenetic studies of engraulidae |
| topic | stolephorus insularis mitogenome phylogenetic relationship |
| url | http://dx.doi.org/10.1080/23802359.2018.1536470 |
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