Formate oxidation in the intestinal mucus layer enhances fitness of Salmonella enterica serovar Typhimurium

ABSTRACT Salmonella enterica serovar Typhimurium induces intestinal inflammation to create a niche that fosters the outgrowth of the pathogen over the gut microbiota. Under inflammatory conditions, Salmonella utilizes terminal electron acceptors generated as byproducts of intestinal inflammation to...

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Main Authors: Maria G. Winter, Elizabeth R. Hughes, Matthew K. Muramatsu, Angel G. Jimenez, Rachael B. Chanin, Luisella Spiga, Caroline C. Gillis, Michael McClelland, Helene Andrews-Polymenis, Sebastian E. Winter
Format: Article
Language:English
Published: American Society for Microbiology 2023-08-01
Series:mBio
Subjects:
Online Access:https://journals.asm.org/doi/10.1128/mbio.00921-23
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author Maria G. Winter
Elizabeth R. Hughes
Matthew K. Muramatsu
Angel G. Jimenez
Rachael B. Chanin
Luisella Spiga
Caroline C. Gillis
Michael McClelland
Helene Andrews-Polymenis
Sebastian E. Winter
author_facet Maria G. Winter
Elizabeth R. Hughes
Matthew K. Muramatsu
Angel G. Jimenez
Rachael B. Chanin
Luisella Spiga
Caroline C. Gillis
Michael McClelland
Helene Andrews-Polymenis
Sebastian E. Winter
author_sort Maria G. Winter
collection DOAJ
description ABSTRACT Salmonella enterica serovar Typhimurium induces intestinal inflammation to create a niche that fosters the outgrowth of the pathogen over the gut microbiota. Under inflammatory conditions, Salmonella utilizes terminal electron acceptors generated as byproducts of intestinal inflammation to generate cellular energy through respiration. However, the electron donating reactions in these electron transport chains are poorly understood. Here, we investigated how formate utilization through the respiratory formate dehydrogenase-N (FdnGHI) and formate dehydrogenase-O (FdoGHI) contribute to gut colonization of Salmonella. Both enzymes fulfilled redundant roles in enhancing fitness in a mouse model of Salmonella-induced colitis, and coupled to tetrathionate, nitrate, and oxygen respiration. The formic acid utilized by Salmonella during infection was generated by its own pyruvate-formate lyase as well as the gut microbiota. Transcription of formate dehydrogenases and pyruvate-formate lyase was significantly higher in bacteria residing in the mucus layer compared to the lumen. Furthermore, formate utilization conferred a more pronounced fitness advantage in the mucus, indicating that formate production and degradation occurred predominantly in the mucus layer. Our results provide new insights into how Salmonella adapts its energy metabolism to the local microenvironment in the gut. IMPORTANCE Bacterial pathogens must not only evade immune responses but also adapt their metabolism to successfully colonize their host. The microenvironments encountered by enteric pathogens differ based on anatomical location, such as small versus large intestine, spatial stratification by host factors, such as mucus layer and antimicrobial peptides, and distinct commensal microbial communities that inhabit these microenvironments. Our understanding of how Salmonella populations adapt its metabolism to different environments in the gut is incomplete. In the current study, we discovered that Salmonella utilizes formate as an electron donor to support respiration, and that formate oxidation predominantly occurs in the mucus layer. Our experiments suggest that spatially distinct Salmonella populations in the mucus layer and the lumen differ in their energy metabolism. Our findings enhance our understanding of the spatial nature of microbial metabolism and may have implications for other enteric pathogens as well as commensal host-associated microbial communities.
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spelling doaj.art-38375e059bcd42f5b8c370ccadc2088f2023-08-31T15:04:20ZengAmerican Society for MicrobiologymBio2150-75112023-08-0114410.1128/mbio.00921-23Formate oxidation in the intestinal mucus layer enhances fitness of Salmonella enterica serovar TyphimuriumMaria G. Winter0Elizabeth R. Hughes1Matthew K. Muramatsu2Angel G. Jimenez3Rachael B. Chanin4Luisella Spiga5Caroline C. Gillis6Michael McClelland7Helene Andrews-Polymenis8Sebastian E. Winter9Department of Internal Medicine, Division of Infectious Diseases, UC Davis School of Medicine , Davis, California, USADepartment of Microbiology, UT Southwestern Medical Center , Dallas, Texas, USADepartment of Internal Medicine, Division of Infectious Diseases, UC Davis School of Medicine , Davis, California, USADepartment of Microbiology, UT Southwestern Medical Center , Dallas, Texas, USADepartment of Microbiology, UT Southwestern Medical Center , Dallas, Texas, USADepartment of Microbiology, UT Southwestern Medical Center , Dallas, Texas, USADepartment of Microbiology, UT Southwestern Medical Center , Dallas, Texas, USADepartment of Microbiology and Molecular Genetics, UC Irvine , Irvine, California, USADepartment of Microbial Pathogenesis and Immunology, Texas A&M College of Medicine , College Station, Texas, USADepartment of Internal Medicine, Division of Infectious Diseases, UC Davis School of Medicine , Davis, California, USAABSTRACT Salmonella enterica serovar Typhimurium induces intestinal inflammation to create a niche that fosters the outgrowth of the pathogen over the gut microbiota. Under inflammatory conditions, Salmonella utilizes terminal electron acceptors generated as byproducts of intestinal inflammation to generate cellular energy through respiration. However, the electron donating reactions in these electron transport chains are poorly understood. Here, we investigated how formate utilization through the respiratory formate dehydrogenase-N (FdnGHI) and formate dehydrogenase-O (FdoGHI) contribute to gut colonization of Salmonella. Both enzymes fulfilled redundant roles in enhancing fitness in a mouse model of Salmonella-induced colitis, and coupled to tetrathionate, nitrate, and oxygen respiration. The formic acid utilized by Salmonella during infection was generated by its own pyruvate-formate lyase as well as the gut microbiota. Transcription of formate dehydrogenases and pyruvate-formate lyase was significantly higher in bacteria residing in the mucus layer compared to the lumen. Furthermore, formate utilization conferred a more pronounced fitness advantage in the mucus, indicating that formate production and degradation occurred predominantly in the mucus layer. Our results provide new insights into how Salmonella adapts its energy metabolism to the local microenvironment in the gut. IMPORTANCE Bacterial pathogens must not only evade immune responses but also adapt their metabolism to successfully colonize their host. The microenvironments encountered by enteric pathogens differ based on anatomical location, such as small versus large intestine, spatial stratification by host factors, such as mucus layer and antimicrobial peptides, and distinct commensal microbial communities that inhabit these microenvironments. Our understanding of how Salmonella populations adapt its metabolism to different environments in the gut is incomplete. In the current study, we discovered that Salmonella utilizes formate as an electron donor to support respiration, and that formate oxidation predominantly occurs in the mucus layer. Our experiments suggest that spatially distinct Salmonella populations in the mucus layer and the lumen differ in their energy metabolism. Our findings enhance our understanding of the spatial nature of microbial metabolism and may have implications for other enteric pathogens as well as commensal host-associated microbial communities.https://journals.asm.org/doi/10.1128/mbio.00921-23Salmonellametabolismcolitis
spellingShingle Maria G. Winter
Elizabeth R. Hughes
Matthew K. Muramatsu
Angel G. Jimenez
Rachael B. Chanin
Luisella Spiga
Caroline C. Gillis
Michael McClelland
Helene Andrews-Polymenis
Sebastian E. Winter
Formate oxidation in the intestinal mucus layer enhances fitness of Salmonella enterica serovar Typhimurium
mBio
Salmonella
metabolism
colitis
title Formate oxidation in the intestinal mucus layer enhances fitness of Salmonella enterica serovar Typhimurium
title_full Formate oxidation in the intestinal mucus layer enhances fitness of Salmonella enterica serovar Typhimurium
title_fullStr Formate oxidation in the intestinal mucus layer enhances fitness of Salmonella enterica serovar Typhimurium
title_full_unstemmed Formate oxidation in the intestinal mucus layer enhances fitness of Salmonella enterica serovar Typhimurium
title_short Formate oxidation in the intestinal mucus layer enhances fitness of Salmonella enterica serovar Typhimurium
title_sort formate oxidation in the intestinal mucus layer enhances fitness of salmonella enterica serovar typhimurium
topic Salmonella
metabolism
colitis
url https://journals.asm.org/doi/10.1128/mbio.00921-23
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