Altering Compositional Properties of Viral Genomes to Design Live-Attenuated Vaccines

Live-attenuated vaccines have been historically used to successfully prevent numerous diseases caused by a broad variety of RNA viruses due to their ability to elicit strong and perdurable immune-protective responses. In recent years, various strategies have been explored to achieve viral attenuatio...

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Main Authors: Marianoel Pereira-Gómez, Lucía Carrau, Álvaro Fajardo, Pilar Moreno, Gonzalo Moratorio
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-06-01
Series:Frontiers in Microbiology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fmicb.2021.676582/full
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author Marianoel Pereira-Gómez
Marianoel Pereira-Gómez
Lucía Carrau
Álvaro Fajardo
Álvaro Fajardo
Pilar Moreno
Pilar Moreno
Gonzalo Moratorio
Gonzalo Moratorio
author_facet Marianoel Pereira-Gómez
Marianoel Pereira-Gómez
Lucía Carrau
Álvaro Fajardo
Álvaro Fajardo
Pilar Moreno
Pilar Moreno
Gonzalo Moratorio
Gonzalo Moratorio
author_sort Marianoel Pereira-Gómez
collection DOAJ
description Live-attenuated vaccines have been historically used to successfully prevent numerous diseases caused by a broad variety of RNA viruses due to their ability to elicit strong and perdurable immune-protective responses. In recent years, various strategies have been explored to achieve viral attenuation by rational genetic design rather than using classic and empirical approaches, based on successive passages in cell culture. A deeper understanding of evolutionary implications of distinct viral genomic compositional aspects, as well as substantial advances in synthetic biology technologies, have provided a framework to achieve new viral attenuation strategies. Herein, we will discuss different approaches that are currently applied to modify compositional features of viruses in order to develop novel live-attenuated vaccines.
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spelling doaj.art-39040cd9277647b7b2f9368726f5e4942022-12-21T22:06:51ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2021-06-011210.3389/fmicb.2021.676582676582Altering Compositional Properties of Viral Genomes to Design Live-Attenuated VaccinesMarianoel Pereira-Gómez0Marianoel Pereira-Gómez1Lucía Carrau2Álvaro Fajardo3Álvaro Fajardo4Pilar Moreno5Pilar Moreno6Gonzalo Moratorio7Gonzalo Moratorio8Laboratorio de Virología Molecular, Centro de Investigaciones Nucleares, Facultad de Ciencias, Universidad de la República, Montevideo, UruguayLaboratorio de Evolución Experimental de Virus, Institut Pasteur de Montevideo, Montevideo, UruguayDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY, United StatesLaboratorio de Virología Molecular, Centro de Investigaciones Nucleares, Facultad de Ciencias, Universidad de la República, Montevideo, UruguayLaboratorio de Evolución Experimental de Virus, Institut Pasteur de Montevideo, Montevideo, UruguayLaboratorio de Virología Molecular, Centro de Investigaciones Nucleares, Facultad de Ciencias, Universidad de la República, Montevideo, UruguayLaboratorio de Evolución Experimental de Virus, Institut Pasteur de Montevideo, Montevideo, UruguayLaboratorio de Virología Molecular, Centro de Investigaciones Nucleares, Facultad de Ciencias, Universidad de la República, Montevideo, UruguayLaboratorio de Evolución Experimental de Virus, Institut Pasteur de Montevideo, Montevideo, UruguayLive-attenuated vaccines have been historically used to successfully prevent numerous diseases caused by a broad variety of RNA viruses due to their ability to elicit strong and perdurable immune-protective responses. In recent years, various strategies have been explored to achieve viral attenuation by rational genetic design rather than using classic and empirical approaches, based on successive passages in cell culture. A deeper understanding of evolutionary implications of distinct viral genomic compositional aspects, as well as substantial advances in synthetic biology technologies, have provided a framework to achieve new viral attenuation strategies. Herein, we will discuss different approaches that are currently applied to modify compositional features of viruses in order to develop novel live-attenuated vaccines.https://www.frontiersin.org/articles/10.3389/fmicb.2021.676582/fullRNA virusesgenome compositioncodon usagecodon pair biasmutational robustnessattenuation
spellingShingle Marianoel Pereira-Gómez
Marianoel Pereira-Gómez
Lucía Carrau
Álvaro Fajardo
Álvaro Fajardo
Pilar Moreno
Pilar Moreno
Gonzalo Moratorio
Gonzalo Moratorio
Altering Compositional Properties of Viral Genomes to Design Live-Attenuated Vaccines
Frontiers in Microbiology
RNA viruses
genome composition
codon usage
codon pair bias
mutational robustness
attenuation
title Altering Compositional Properties of Viral Genomes to Design Live-Attenuated Vaccines
title_full Altering Compositional Properties of Viral Genomes to Design Live-Attenuated Vaccines
title_fullStr Altering Compositional Properties of Viral Genomes to Design Live-Attenuated Vaccines
title_full_unstemmed Altering Compositional Properties of Viral Genomes to Design Live-Attenuated Vaccines
title_short Altering Compositional Properties of Viral Genomes to Design Live-Attenuated Vaccines
title_sort altering compositional properties of viral genomes to design live attenuated vaccines
topic RNA viruses
genome composition
codon usage
codon pair bias
mutational robustness
attenuation
url https://www.frontiersin.org/articles/10.3389/fmicb.2021.676582/full
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