Finding Friends in the Crowd: Three-Dimensional Cliques of Topological Genomic Domains
The mammalian genome is intricately folded in a three-dimensional topology believed to be important for the orchestration of gene expression regulating development, differentiation and tissue homeostasis. Important features of spatial genome conformation in the nucleus are promoter-enhancer contacts...
Main Authors: | Philippe Collas, Tharvesh M. Liyakat Ali, Annaël Brunet, Thomas Germier |
---|---|
Format: | Article |
Language: | English |
Published: |
Frontiers Media S.A.
2019-06-01
|
Series: | Frontiers in Genetics |
Subjects: | |
Online Access: | https://www.frontiersin.org/article/10.3389/fgene.2019.00602/full |
Similar Items
-
TAD cliques predict key features of chromatin organization
by: Tharvesh M. Liyakat Ali, et al.
Published: (2021-07-01) -
Greater rate of cephalic screw mobilisation following proximal femoral nailing in hip fractures with a tip–apex distance (TAD) and a calcar referenced TAD greater than 25 mm
by: Rocco Aicale, et al.
Published: (2018-05-01) -
SpectralTAD: an R package for defining a hierarchy of topologically associated domains using spectral clustering
by: Kellen G. Cresswell, et al.
Published: (2020-07-01) -
The effects of common structural variants on 3D chromatin structure
by: Omar Shanta, et al.
Published: (2020-01-01) -
Structural basis for the preservation of a subset of topologically associating domains in interphase chromosomes upon cohesin depletion
by: Davin Jeong, et al.
Published: (2024-03-01)