Complete mitogenome of the shortfin spiny eel, Notacanthus bonaparte (Elopomorpha; Notacanthiformes)
Deep-sea fish taxa are elusive, difficult to study, and in multiple cases, represent taxonomic conundrums. Here, we sequenced the complete mitogenome of the shortfin spiny eel, Notacanthus bonaparte, for the first time using low coverage Illumina Paired-end (PE) sequencing. The shortfin spiny eel be...
| Main Authors: | , , , , , , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2020-04-01
|
| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1736672 |
| _version_ | 1827772907048140800 |
|---|---|
| author | David Barros-García André Gomes-dos-Santos André M. Machado L. Filipe C. Castro Alejandro de Carlos Rafael Bañón Isabel Bruno Juan C. Arronte Elsa Froufe |
| author_facet | David Barros-García André Gomes-dos-Santos André M. Machado L. Filipe C. Castro Alejandro de Carlos Rafael Bañón Isabel Bruno Juan C. Arronte Elsa Froufe |
| author_sort | David Barros-García |
| collection | DOAJ |
| description | Deep-sea fish taxa are elusive, difficult to study, and in multiple cases, represent taxonomic conundrums. Here, we sequenced the complete mitogenome of the shortfin spiny eel, Notacanthus bonaparte, for the first time using low coverage Illumina Paired-end (PE) sequencing. The shortfin spiny eel belongs to the order Notacanthiformes, a relatively unknown taxon of deep-sea marine fishes mostly benthopelagic and bathydemersal. The total length of the assembled mitogenome is 16,623 bp and displays the expected gene orientation for vertebrate mtDNA. Phylogenetic analyses combining all the available mitogenomes of the order Notacanthiformes were performed. The position of N. bonaparte as a member of the Notacanthidae family was confirmed. This mitogenome provides a valuable baseline for future research of N. bonaparte. |
| first_indexed | 2024-03-11T13:15:28Z |
| format | Article |
| id | doaj.art-3919656292ea49e8a04039b9777b19b1 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:15:28Z |
| publishDate | 2020-04-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-3919656292ea49e8a04039b9777b19b12023-11-03T13:50:18ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-04-01521421142210.1080/23802359.2020.17366721736672Complete mitogenome of the shortfin spiny eel, Notacanthus bonaparte (Elopomorpha; Notacanthiformes)David Barros-García0André Gomes-dos-Santos1André M. Machado2L. Filipe C. Castro3Alejandro de Carlos4Rafael Bañón5Isabel Bruno6Juan C. Arronte7Elsa Froufe8University of PortoUniversity of PortoUniversity of PortoUniversity of PortoUniversidade de VigoXunta de GaliciaCentro Oceanográfico de VigoCentro Oceanográfico de CádizUniversity of PortoDeep-sea fish taxa are elusive, difficult to study, and in multiple cases, represent taxonomic conundrums. Here, we sequenced the complete mitogenome of the shortfin spiny eel, Notacanthus bonaparte, for the first time using low coverage Illumina Paired-end (PE) sequencing. The shortfin spiny eel belongs to the order Notacanthiformes, a relatively unknown taxon of deep-sea marine fishes mostly benthopelagic and bathydemersal. The total length of the assembled mitogenome is 16,623 bp and displays the expected gene orientation for vertebrate mtDNA. Phylogenetic analyses combining all the available mitogenomes of the order Notacanthiformes were performed. The position of N. bonaparte as a member of the Notacanthidae family was confirmed. This mitogenome provides a valuable baseline for future research of N. bonaparte.http://dx.doi.org/10.1080/23802359.2020.1736672phylogenydeep-seanotacanthidaemitochondrial |
| spellingShingle | David Barros-García André Gomes-dos-Santos André M. Machado L. Filipe C. Castro Alejandro de Carlos Rafael Bañón Isabel Bruno Juan C. Arronte Elsa Froufe Complete mitogenome of the shortfin spiny eel, Notacanthus bonaparte (Elopomorpha; Notacanthiformes) Mitochondrial DNA. Part B. Resources phylogeny deep-sea notacanthidae mitochondrial |
| title | Complete mitogenome of the shortfin spiny eel, Notacanthus bonaparte (Elopomorpha; Notacanthiformes) |
| title_full | Complete mitogenome of the shortfin spiny eel, Notacanthus bonaparte (Elopomorpha; Notacanthiformes) |
| title_fullStr | Complete mitogenome of the shortfin spiny eel, Notacanthus bonaparte (Elopomorpha; Notacanthiformes) |
| title_full_unstemmed | Complete mitogenome of the shortfin spiny eel, Notacanthus bonaparte (Elopomorpha; Notacanthiformes) |
| title_short | Complete mitogenome of the shortfin spiny eel, Notacanthus bonaparte (Elopomorpha; Notacanthiformes) |
| title_sort | complete mitogenome of the shortfin spiny eel notacanthus bonaparte elopomorpha notacanthiformes |
| topic | phylogeny deep-sea notacanthidae mitochondrial |
| url | http://dx.doi.org/10.1080/23802359.2020.1736672 |
| work_keys_str_mv | AT davidbarrosgarcia completemitogenomeoftheshortfinspinyeelnotacanthusbonaparteelopomorphanotacanthiformes AT andregomesdossantos completemitogenomeoftheshortfinspinyeelnotacanthusbonaparteelopomorphanotacanthiformes AT andremmachado completemitogenomeoftheshortfinspinyeelnotacanthusbonaparteelopomorphanotacanthiformes AT lfilipeccastro completemitogenomeoftheshortfinspinyeelnotacanthusbonaparteelopomorphanotacanthiformes AT alejandrodecarlos completemitogenomeoftheshortfinspinyeelnotacanthusbonaparteelopomorphanotacanthiformes AT rafaelbanon completemitogenomeoftheshortfinspinyeelnotacanthusbonaparteelopomorphanotacanthiformes AT isabelbruno completemitogenomeoftheshortfinspinyeelnotacanthusbonaparteelopomorphanotacanthiformes AT juancarronte completemitogenomeoftheshortfinspinyeelnotacanthusbonaparteelopomorphanotacanthiformes AT elsafroufe completemitogenomeoftheshortfinspinyeelnotacanthusbonaparteelopomorphanotacanthiformes |