The complete chloroplast genome of Lilium amoenum (Liliopsida: Liliaceae) from Yunnan, China
Lilium amoenum E. H. Wilson ex Sealy is classified in Liliaceae, and it is an important ornamental plant with wonderful rose-red color and pleasant rose fragrance. In this study, we sequenced the complete chloroplast genome of L. amoenum by Illumina Hiseq X Ten and PacBio RS technologies. The genome...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-03-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1885318 |
| _version_ | 1797638923768299520 |
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| author | Weiwei Bai Jingzhi Wu Shuilian He Zhijia Gu Hui Jiang Hongzhi Wu |
| author_facet | Weiwei Bai Jingzhi Wu Shuilian He Zhijia Gu Hui Jiang Hongzhi Wu |
| author_sort | Weiwei Bai |
| collection | DOAJ |
| description | Lilium amoenum E. H. Wilson ex Sealy is classified in Liliaceae, and it is an important ornamental plant with wonderful rose-red color and pleasant rose fragrance. In this study, we sequenced the complete chloroplast genome of L. amoenum by Illumina Hiseq X Ten and PacBio RS technologies. The genome size of L. amoenum is 152,280 bp, and displays a typical quadripartite structure: one large single-copy (LSC, 81,977 bp), one small single-copy (SSC, 17,539 bp), and a pair of inverted repeat regions (IRs, 26,382 bp). The overall GC content was 37.0%. The complete genome contained 131 genes, including 85 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis showed that L. amoenum is closely related to L. taliense and L. bakerianum. The present study could afford crucial genetic information for further researches on the genus and related genera. |
| first_indexed | 2024-03-11T13:10:24Z |
| format | Article |
| id | doaj.art-391a6447600748c09800fc1b2317913d |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:10:24Z |
| publishDate | 2021-03-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-391a6447600748c09800fc1b2317913d2023-11-03T14:08:20ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-03-016385585710.1080/23802359.2021.18853181885318The complete chloroplast genome of Lilium amoenum (Liliopsida: Liliaceae) from Yunnan, ChinaWeiwei Bai0Jingzhi Wu1Shuilian He2Zhijia Gu3Hui Jiang4Hongzhi Wu5Yunnan Agricultural UniversityYunnan Agricultural UniversityYunnan Agricultural UniversityYunnan Agricultural UniversityYunnan Agricultural UniversityYunnan Agricultural UniversityLilium amoenum E. H. Wilson ex Sealy is classified in Liliaceae, and it is an important ornamental plant with wonderful rose-red color and pleasant rose fragrance. In this study, we sequenced the complete chloroplast genome of L. amoenum by Illumina Hiseq X Ten and PacBio RS technologies. The genome size of L. amoenum is 152,280 bp, and displays a typical quadripartite structure: one large single-copy (LSC, 81,977 bp), one small single-copy (SSC, 17,539 bp), and a pair of inverted repeat regions (IRs, 26,382 bp). The overall GC content was 37.0%. The complete genome contained 131 genes, including 85 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis showed that L. amoenum is closely related to L. taliense and L. bakerianum. The present study could afford crucial genetic information for further researches on the genus and related genera.http://dx.doi.org/10.1080/23802359.2021.1885318chloroplast genomelilium amoenumphylogenetic analysis |
| spellingShingle | Weiwei Bai Jingzhi Wu Shuilian He Zhijia Gu Hui Jiang Hongzhi Wu The complete chloroplast genome of Lilium amoenum (Liliopsida: Liliaceae) from Yunnan, China Mitochondrial DNA. Part B. Resources chloroplast genome lilium amoenum phylogenetic analysis |
| title | The complete chloroplast genome of Lilium amoenum (Liliopsida: Liliaceae) from Yunnan, China |
| title_full | The complete chloroplast genome of Lilium amoenum (Liliopsida: Liliaceae) from Yunnan, China |
| title_fullStr | The complete chloroplast genome of Lilium amoenum (Liliopsida: Liliaceae) from Yunnan, China |
| title_full_unstemmed | The complete chloroplast genome of Lilium amoenum (Liliopsida: Liliaceae) from Yunnan, China |
| title_short | The complete chloroplast genome of Lilium amoenum (Liliopsida: Liliaceae) from Yunnan, China |
| title_sort | complete chloroplast genome of lilium amoenum liliopsida liliaceae from yunnan china |
| topic | chloroplast genome lilium amoenum phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2021.1885318 |
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