The second complete chloroplast genome sequence of the Viburnum erosum (Adoxaceae) showed a low level of intra-species variations
We presented the second complete chloroplast genome of the plant. The length of chloroplast genome is 158,587 bp, consisting of four subregions: 87,050 bp of LSC and 18,503 bp of SSC regions separated by a pair of 26,517 bp IR regions. It includes 129 genes (84 protein-coding genes, 8 rRNAs, and 37...
| Main Authors: | , , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1698360 |
| _version_ | 1797639483832664064 |
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| author | Yun Gyeong Choi Narae Yun Jongsun Park Hong Xi Juhyeon Min Yongsung Kim Sang-Hun Oh |
| author_facet | Yun Gyeong Choi Narae Yun Jongsun Park Hong Xi Juhyeon Min Yongsung Kim Sang-Hun Oh |
| author_sort | Yun Gyeong Choi |
| collection | DOAJ |
| description | We presented the second complete chloroplast genome of the plant. The length of chloroplast genome is 158,587 bp, consisting of four subregions: 87,050 bp of LSC and 18,503 bp of SSC regions separated by a pair of 26,517 bp IR regions. It includes 129 genes (84 protein-coding genes, 8 rRNAs, and 37 tRNAs). A low-level of molecular variation within Viburnum erosum was found with 16 SNPs and 49 indels. The phylogenetic tree shows that the two accessions of V. erosum are clustered with Viburnum japonicum with no resolution between the species, suggesting that chloroplast genome in these species evolve slowly. |
| first_indexed | 2024-03-11T13:18:24Z |
| format | Article |
| id | doaj.art-39b64b77853f47918fe7d9f41137813b |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:18:24Z |
| publishDate | 2020-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-39b64b77853f47918fe7d9f41137813b2023-11-03T11:00:18ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-01-015127127210.1080/23802359.2019.16983601698360The second complete chloroplast genome sequence of the Viburnum erosum (Adoxaceae) showed a low level of intra-species variationsYun Gyeong Choi0Narae Yun1Jongsun Park2Hong Xi3Juhyeon Min4Yongsung Kim5Sang-Hun Oh6Department of Biology, Daejeon UniversityDepartment of Biology, Daejeon UniversityInfoboss Co., LtdInfoboss Co., LtdInfoboss Co., LtdInfoboss Co., LtdDepartment of Biology, Daejeon UniversityWe presented the second complete chloroplast genome of the plant. The length of chloroplast genome is 158,587 bp, consisting of four subregions: 87,050 bp of LSC and 18,503 bp of SSC regions separated by a pair of 26,517 bp IR regions. It includes 129 genes (84 protein-coding genes, 8 rRNAs, and 37 tRNAs). A low-level of molecular variation within Viburnum erosum was found with 16 SNPs and 49 indels. The phylogenetic tree shows that the two accessions of V. erosum are clustered with Viburnum japonicum with no resolution between the species, suggesting that chloroplast genome in these species evolve slowly.http://dx.doi.org/10.1080/23802359.2019.1698360viburnumchloroplast genomeviburnum erosumadoxaceaeintraspecies variations |
| spellingShingle | Yun Gyeong Choi Narae Yun Jongsun Park Hong Xi Juhyeon Min Yongsung Kim Sang-Hun Oh The second complete chloroplast genome sequence of the Viburnum erosum (Adoxaceae) showed a low level of intra-species variations Mitochondrial DNA. Part B. Resources viburnum chloroplast genome viburnum erosum adoxaceae intraspecies variations |
| title | The second complete chloroplast genome sequence of the Viburnum erosum (Adoxaceae) showed a low level of intra-species variations |
| title_full | The second complete chloroplast genome sequence of the Viburnum erosum (Adoxaceae) showed a low level of intra-species variations |
| title_fullStr | The second complete chloroplast genome sequence of the Viburnum erosum (Adoxaceae) showed a low level of intra-species variations |
| title_full_unstemmed | The second complete chloroplast genome sequence of the Viburnum erosum (Adoxaceae) showed a low level of intra-species variations |
| title_short | The second complete chloroplast genome sequence of the Viburnum erosum (Adoxaceae) showed a low level of intra-species variations |
| title_sort | second complete chloroplast genome sequence of the viburnum erosum adoxaceae showed a low level of intra species variations |
| topic | viburnum chloroplast genome viburnum erosum adoxaceae intraspecies variations |
| url | http://dx.doi.org/10.1080/23802359.2019.1698360 |
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