Complete chloroplast genome sequences of Poikilospermum lanceolatum (Urticeae)
The complete chloroplast genome of Poikilospermum lanceolatum was sequenced using HiSeq4000 of Illumina. The length of this genome was 153, 454 bp, including a large single copy (LSC) region (84,202 bp), a small single copy (SSC) region (18,172 bp), and two inverted repeat (IR) regions (25,540 bp)....
| Main Authors: | , , , , , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2019-07-01
|
| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1623117 |
| _version_ | 1797639792453746688 |
|---|---|
| author | Xianhan Huang Tao Deng Nan Lin Zhenyu Lv Xu Zhang Zhuo Zhou Yuehua Wang Hang Sun |
| author_facet | Xianhan Huang Tao Deng Nan Lin Zhenyu Lv Xu Zhang Zhuo Zhou Yuehua Wang Hang Sun |
| author_sort | Xianhan Huang |
| collection | DOAJ |
| description | The complete chloroplast genome of Poikilospermum lanceolatum was sequenced using HiSeq4000 of Illumina. The length of this genome was 153, 454 bp, including a large single copy (LSC) region (84,202 bp), a small single copy (SSC) region (18,172 bp), and two inverted repeat (IR) regions (25,540 bp). The overall GC content of the genome of P. lanceolatum was 36.9%. The genome included 111 unique genes (78 protein-coding genes, 29 tRNA genes, and four rRNA genes). Phylogenetic analysis based on 67 protein-coding genes showed that Boehmerieae was sister to P. lanceolatum, with 100% bootstrap values. |
| first_indexed | 2024-03-11T13:22:13Z |
| format | Article |
| id | doaj.art-39ea5f7a379940b7856818a8d5faca23 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:22:13Z |
| publishDate | 2019-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-39ea5f7a379940b7856818a8d5faca232023-11-03T10:06:47ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-07-01422131213210.1080/23802359.2019.16231171623117Complete chloroplast genome sequences of Poikilospermum lanceolatum (Urticeae)Xianhan Huang0Tao Deng1Nan Lin2Zhenyu Lv3Xu Zhang4Zhuo Zhou5Yuehua Wang6Hang Sun7Yunnan UniversityChinese Academy of SciencesChinese Academy of SciencesYunnan Normal UniversityChinese Academy of SciencesChinese Academy of SciencesYunnan UniversityChinese Academy of SciencesThe complete chloroplast genome of Poikilospermum lanceolatum was sequenced using HiSeq4000 of Illumina. The length of this genome was 153, 454 bp, including a large single copy (LSC) region (84,202 bp), a small single copy (SSC) region (18,172 bp), and two inverted repeat (IR) regions (25,540 bp). The overall GC content of the genome of P. lanceolatum was 36.9%. The genome included 111 unique genes (78 protein-coding genes, 29 tRNA genes, and four rRNA genes). Phylogenetic analysis based on 67 protein-coding genes showed that Boehmerieae was sister to P. lanceolatum, with 100% bootstrap values.http://dx.doi.org/10.1080/23802359.2019.1623117chloroplast genomepoikilospermum lanceolatumphylogenetic analysis |
| spellingShingle | Xianhan Huang Tao Deng Nan Lin Zhenyu Lv Xu Zhang Zhuo Zhou Yuehua Wang Hang Sun Complete chloroplast genome sequences of Poikilospermum lanceolatum (Urticeae) Mitochondrial DNA. Part B. Resources chloroplast genome poikilospermum lanceolatum phylogenetic analysis |
| title | Complete chloroplast genome sequences of Poikilospermum lanceolatum (Urticeae) |
| title_full | Complete chloroplast genome sequences of Poikilospermum lanceolatum (Urticeae) |
| title_fullStr | Complete chloroplast genome sequences of Poikilospermum lanceolatum (Urticeae) |
| title_full_unstemmed | Complete chloroplast genome sequences of Poikilospermum lanceolatum (Urticeae) |
| title_short | Complete chloroplast genome sequences of Poikilospermum lanceolatum (Urticeae) |
| title_sort | complete chloroplast genome sequences of poikilospermum lanceolatum urticeae |
| topic | chloroplast genome poikilospermum lanceolatum phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2019.1623117 |
| work_keys_str_mv | AT xianhanhuang completechloroplastgenomesequencesofpoikilospermumlanceolatumurticeae AT taodeng completechloroplastgenomesequencesofpoikilospermumlanceolatumurticeae AT nanlin completechloroplastgenomesequencesofpoikilospermumlanceolatumurticeae AT zhenyulv completechloroplastgenomesequencesofpoikilospermumlanceolatumurticeae AT xuzhang completechloroplastgenomesequencesofpoikilospermumlanceolatumurticeae AT zhuozhou completechloroplastgenomesequencesofpoikilospermumlanceolatumurticeae AT yuehuawang completechloroplastgenomesequencesofpoikilospermumlanceolatumurticeae AT hangsun completechloroplastgenomesequencesofpoikilospermumlanceolatumurticeae |