Resurgence of Influenza Circulation in the Russian Federation during the Delta and Omicron COVID-19 Era

Influenza circulation was substantially reduced after March 2020 in the European region and globally due to the wide introduction of non-pharmaceutical interventions (NPIs) against COVID-19. The virus, however, has been actively circulating in natural reservoirs. In summer 2021, NPIs were loosened i...

Full description

Bibliographic Details
Main Authors: Anna Sominina, Daria Danilenko, Andrey Komissarov, Ludmila Karpova, Maria Pisareva, Artem Fadeev, Nadezhda Konovalova, Mikhail Eropkin, Kirill Stolyarov, Anna Shtro, Elena Burtseva, Dmitry Lioznov
Format: Article
Language:English
Published: MDPI AG 2022-08-01
Series:Viruses
Subjects:
Online Access:https://www.mdpi.com/1999-4915/14/9/1909
_version_ 1797481406939529216
author Anna Sominina
Daria Danilenko
Andrey Komissarov
Ludmila Karpova
Maria Pisareva
Artem Fadeev
Nadezhda Konovalova
Mikhail Eropkin
Kirill Stolyarov
Anna Shtro
Elena Burtseva
Dmitry Lioznov
author_facet Anna Sominina
Daria Danilenko
Andrey Komissarov
Ludmila Karpova
Maria Pisareva
Artem Fadeev
Nadezhda Konovalova
Mikhail Eropkin
Kirill Stolyarov
Anna Shtro
Elena Burtseva
Dmitry Lioznov
author_sort Anna Sominina
collection DOAJ
description Influenza circulation was substantially reduced after March 2020 in the European region and globally due to the wide introduction of non-pharmaceutical interventions (NPIs) against COVID-19. The virus, however, has been actively circulating in natural reservoirs. In summer 2021, NPIs were loosened in Russia, and influenza activity resumed shortly thereafter. Here, we summarize the epidemiological and virological data on the influenza epidemic in Russia in 2021–2022 obtained by the two National Influenza Centers. We demonstrate that the commonly used baseline for acute respiratory infection (ARI) is no longer sufficiently sensitive and BL for ILI incidence was more specific for early recognition of the epidemic. We also present the results of PCR detection of influenza, SARS-CoV-2 and other respiratory viruses as well as antigenic and genetic analysis of influenza viruses. Influenza A(H3N2) prevailed this season with influenza B being detected at low levels at the end of the epidemic. The majority of A(H3N2) viruses were antigenically and genetically homogenous and belonged to the clade 3C.2a1b.2a.2 of the vaccine strain A/Darwin/9/2021 for the season 2022–2023. All influenza B viruses belonged to the Victoria lineage and were similar to the influenza B/Austria/1359417/2021 virus. No influenza A(H1N1)pdm09 and influenza B/Yamagata lineage was isolated last season.
first_indexed 2024-03-09T22:14:07Z
format Article
id doaj.art-3b061a5c5e5e45cb92d5a3b00359f29b
institution Directory Open Access Journal
issn 1999-4915
language English
last_indexed 2024-03-09T22:14:07Z
publishDate 2022-08-01
publisher MDPI AG
record_format Article
series Viruses
spelling doaj.art-3b061a5c5e5e45cb92d5a3b00359f29b2023-11-23T19:26:15ZengMDPI AGViruses1999-49152022-08-01149190910.3390/v14091909Resurgence of Influenza Circulation in the Russian Federation during the Delta and Omicron COVID-19 EraAnna Sominina0Daria Danilenko1Andrey Komissarov2Ludmila Karpova3Maria Pisareva4Artem Fadeev5Nadezhda Konovalova6Mikhail Eropkin7Kirill Stolyarov8Anna Shtro9Elena Burtseva10Dmitry Lioznov11Smorodintsev Research Institute of Influenza, 197376 Saint Petersburg, RussiaSmorodintsev Research Institute of Influenza, 197376 Saint Petersburg, RussiaSmorodintsev Research Institute of Influenza, 197376 Saint Petersburg, RussiaSmorodintsev Research Institute of Influenza, 197376 Saint Petersburg, RussiaSmorodintsev Research Institute of Influenza, 197376 Saint Petersburg, RussiaSmorodintsev Research Institute of Influenza, 197376 Saint Petersburg, RussiaSmorodintsev Research Institute of Influenza, 197376 Saint Petersburg, RussiaSmorodintsev Research Institute of Influenza, 197376 Saint Petersburg, RussiaSmorodintsev Research Institute of Influenza, 197376 Saint Petersburg, RussiaSmorodintsev Research Institute of Influenza, 197376 Saint Petersburg, RussiaNational Research Center for Epidemiology and Microbiology Named after N.F. Gamaleya, 123098 Moscow, RussiaSmorodintsev Research Institute of Influenza, 197376 Saint Petersburg, RussiaInfluenza circulation was substantially reduced after March 2020 in the European region and globally due to the wide introduction of non-pharmaceutical interventions (NPIs) against COVID-19. The virus, however, has been actively circulating in natural reservoirs. In summer 2021, NPIs were loosened in Russia, and influenza activity resumed shortly thereafter. Here, we summarize the epidemiological and virological data on the influenza epidemic in Russia in 2021–2022 obtained by the two National Influenza Centers. We demonstrate that the commonly used baseline for acute respiratory infection (ARI) is no longer sufficiently sensitive and BL for ILI incidence was more specific for early recognition of the epidemic. We also present the results of PCR detection of influenza, SARS-CoV-2 and other respiratory viruses as well as antigenic and genetic analysis of influenza viruses. Influenza A(H3N2) prevailed this season with influenza B being detected at low levels at the end of the epidemic. The majority of A(H3N2) viruses were antigenically and genetically homogenous and belonged to the clade 3C.2a1b.2a.2 of the vaccine strain A/Darwin/9/2021 for the season 2022–2023. All influenza B viruses belonged to the Victoria lineage and were similar to the influenza B/Austria/1359417/2021 virus. No influenza A(H1N1)pdm09 and influenza B/Yamagata lineage was isolated last season.https://www.mdpi.com/1999-4915/14/9/1909influenzarespiratory virusesSARS-CoV-2surveillanceincidencehospitalization
spellingShingle Anna Sominina
Daria Danilenko
Andrey Komissarov
Ludmila Karpova
Maria Pisareva
Artem Fadeev
Nadezhda Konovalova
Mikhail Eropkin
Kirill Stolyarov
Anna Shtro
Elena Burtseva
Dmitry Lioznov
Resurgence of Influenza Circulation in the Russian Federation during the Delta and Omicron COVID-19 Era
Viruses
influenza
respiratory viruses
SARS-CoV-2
surveillance
incidence
hospitalization
title Resurgence of Influenza Circulation in the Russian Federation during the Delta and Omicron COVID-19 Era
title_full Resurgence of Influenza Circulation in the Russian Federation during the Delta and Omicron COVID-19 Era
title_fullStr Resurgence of Influenza Circulation in the Russian Federation during the Delta and Omicron COVID-19 Era
title_full_unstemmed Resurgence of Influenza Circulation in the Russian Federation during the Delta and Omicron COVID-19 Era
title_short Resurgence of Influenza Circulation in the Russian Federation during the Delta and Omicron COVID-19 Era
title_sort resurgence of influenza circulation in the russian federation during the delta and omicron covid 19 era
topic influenza
respiratory viruses
SARS-CoV-2
surveillance
incidence
hospitalization
url https://www.mdpi.com/1999-4915/14/9/1909
work_keys_str_mv AT annasominina resurgenceofinfluenzacirculationintherussianfederationduringthedeltaandomicroncovid19era
AT dariadanilenko resurgenceofinfluenzacirculationintherussianfederationduringthedeltaandomicroncovid19era
AT andreykomissarov resurgenceofinfluenzacirculationintherussianfederationduringthedeltaandomicroncovid19era
AT ludmilakarpova resurgenceofinfluenzacirculationintherussianfederationduringthedeltaandomicroncovid19era
AT mariapisareva resurgenceofinfluenzacirculationintherussianfederationduringthedeltaandomicroncovid19era
AT artemfadeev resurgenceofinfluenzacirculationintherussianfederationduringthedeltaandomicroncovid19era
AT nadezhdakonovalova resurgenceofinfluenzacirculationintherussianfederationduringthedeltaandomicroncovid19era
AT mikhaileropkin resurgenceofinfluenzacirculationintherussianfederationduringthedeltaandomicroncovid19era
AT kirillstolyarov resurgenceofinfluenzacirculationintherussianfederationduringthedeltaandomicroncovid19era
AT annashtro resurgenceofinfluenzacirculationintherussianfederationduringthedeltaandomicroncovid19era
AT elenaburtseva resurgenceofinfluenzacirculationintherussianfederationduringthedeltaandomicroncovid19era
AT dmitrylioznov resurgenceofinfluenzacirculationintherussianfederationduringthedeltaandomicroncovid19era