RNA localization in cytoplasm and nucleus of human embryonic stem cells

Objective To investigate the localization of RNA in cytoplasm and nucleus of human embryonic stem cells (hESCs). Methods After separating cytoplasm and nucleus of hESCs, RNAs were extracted for sequencing, and the localization characteristics of RNAs were analyzed by bioinformatics. RT-qPCR was used...

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Main Author: ZHOU Fan-qi, FENG Wen-xin, TAN Pu-wen, MA Yan-ni, WANG Dong, YU Jia
Format: Article
Language:zho
Published: Institute of Basic Medical Sciences and Peking Union Medical College Hospital, Chinese Academy of Medical Sciences / Peking Union Medical College. 2020-06-01
Series:Jichu yixue yu linchuang
Subjects:
Online Access:http://journal11.magtechjournal.com/Jwk_jcyxylc/fileup/1001-6325/PDF/a200233.pdf
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author ZHOU Fan-qi, FENG Wen-xin, TAN Pu-wen, MA Yan-ni, WANG Dong, YU Jia
author_facet ZHOU Fan-qi, FENG Wen-xin, TAN Pu-wen, MA Yan-ni, WANG Dong, YU Jia
author_sort ZHOU Fan-qi, FENG Wen-xin, TAN Pu-wen, MA Yan-ni, WANG Dong, YU Jia
collection DOAJ
description Objective To investigate the localization of RNA in cytoplasm and nucleus of human embryonic stem cells (hESCs). Methods After separating cytoplasm and nucleus of hESCs, RNAs were extracted for sequencing, and the localization characteristics of RNAs were analyzed by bioinformatics. RT-qPCR was used to verify the localization of these RNAs. Results More RNA types were found in the cytoplasm than nucleus, as well as specifically locational RNAs (2 952 in the cytoplasm and 634 in the nucleus, respectively). Conclusions The localization map of RNA in cytoplasm and nucleus of hESCs is described,and the localization of many RNAs is verified.
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publisher Institute of Basic Medical Sciences and Peking Union Medical College Hospital, Chinese Academy of Medical Sciences / Peking Union Medical College.
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spelling doaj.art-3b0f22d2ad7b44aca6ad5b2e4acb529b2024-01-05T03:15:51ZzhoInstitute of Basic Medical Sciences and Peking Union Medical College Hospital, Chinese Academy of Medical Sciences / Peking Union Medical College.Jichu yixue yu linchuang1001-63252020-06-01406765770RNA localization in cytoplasm and nucleus of human embryonic stem cellsZHOU Fan-qi, FENG Wen-xin, TAN Pu-wen, MA Yan-ni, WANG Dong, YU Jia01. State Key Laboratory of Medical Molecular Biology, Institute of Basic Medical Sciences CAMS, School of Basic Medicine PUMC, Beijing 100005;;2. Henan Geology Vocational College, Zhengzhou 450000;;3. Department of Bioinformatics, School of Basic Medical Sciences, Southern Medical University, Guangzhou 510000, ChinaObjective To investigate the localization of RNA in cytoplasm and nucleus of human embryonic stem cells (hESCs). Methods After separating cytoplasm and nucleus of hESCs, RNAs were extracted for sequencing, and the localization characteristics of RNAs were analyzed by bioinformatics. RT-qPCR was used to verify the localization of these RNAs. Results More RNA types were found in the cytoplasm than nucleus, as well as specifically locational RNAs (2 952 in the cytoplasm and 634 in the nucleus, respectively). Conclusions The localization map of RNA in cytoplasm and nucleus of hESCs is described,and the localization of many RNAs is verified.http://journal11.magtechjournal.com/Jwk_jcyxylc/fileup/1001-6325/PDF/a200233.pdfhuman embryonic stem cells (hescs)|rna localization
spellingShingle ZHOU Fan-qi, FENG Wen-xin, TAN Pu-wen, MA Yan-ni, WANG Dong, YU Jia
RNA localization in cytoplasm and nucleus of human embryonic stem cells
Jichu yixue yu linchuang
human embryonic stem cells (hescs)|rna localization
title RNA localization in cytoplasm and nucleus of human embryonic stem cells
title_full RNA localization in cytoplasm and nucleus of human embryonic stem cells
title_fullStr RNA localization in cytoplasm and nucleus of human embryonic stem cells
title_full_unstemmed RNA localization in cytoplasm and nucleus of human embryonic stem cells
title_short RNA localization in cytoplasm and nucleus of human embryonic stem cells
title_sort rna localization in cytoplasm and nucleus of human embryonic stem cells
topic human embryonic stem cells (hescs)|rna localization
url http://journal11.magtechjournal.com/Jwk_jcyxylc/fileup/1001-6325/PDF/a200233.pdf
work_keys_str_mv AT zhoufanqifengwenxintanpuwenmayanniwangdongyujia rnalocalizationincytoplasmandnucleusofhumanembryonicstemcells