Applications of cutting-edge artificial intelligence technologies in biomedical literature and document mining

The biomedical literature is a vast and invaluable resource for biomedical research. Integrating knowledge from the literature with biomedical data can help biological studies and the clinical decision-making process. Efforts have been made to gather information from the biomedical literature and cr...

Full description

Bibliographic Details
Main Authors: He Fei, Liu Kai, Yang Zhiyuan, Hannink Mark, Hammer Richard D., Popescu Mihail, Xu Dong
Format: Article
Language:English
Published: De Gruyter 2023-06-01
Series:Medical Review
Subjects:
Online Access:https://doi.org/10.1515/mr-2023-0011
_version_ 1797682386435047424
author He Fei
Liu Kai
Yang Zhiyuan
Hannink Mark
Hammer Richard D.
Popescu Mihail
Xu Dong
author_facet He Fei
Liu Kai
Yang Zhiyuan
Hannink Mark
Hammer Richard D.
Popescu Mihail
Xu Dong
author_sort He Fei
collection DOAJ
description The biomedical literature is a vast and invaluable resource for biomedical research. Integrating knowledge from the literature with biomedical data can help biological studies and the clinical decision-making process. Efforts have been made to gather information from the biomedical literature and create biomedical knowledge bases, such as KEGG and Reactome. However, manual curation remains the primary method to retrieve accurate biomedical entities and relationships. Manual curation becomes increasingly challenging and costly as the volume of biomedical publications quickly grows. Fortunately, recent advancements in Artificial Intelligence (AI) technologies offer the potential to automate the process of curating, updating, and integrating knowledge from the literature. Herein, we highlight the AI capabilities to aid in mining knowledge and building the knowledge base from the biomedical literature.
first_indexed 2024-03-11T23:58:59Z
format Article
id doaj.art-3b1b8aea63fc46059b4d88cbd2ced598
institution Directory Open Access Journal
issn 2749-9642
language English
last_indexed 2024-03-11T23:58:59Z
publishDate 2023-06-01
publisher De Gruyter
record_format Article
series Medical Review
spelling doaj.art-3b1b8aea63fc46059b4d88cbd2ced5982023-09-18T06:31:57ZengDe GruyterMedical Review2749-96422023-06-013320020410.1515/mr-2023-0011Applications of cutting-edge artificial intelligence technologies in biomedical literature and document miningHe Fei0Liu Kai1Yang Zhiyuan2Hannink Mark3Hammer Richard D.4Popescu Mihail5Xu Dong6School of Information Science and Technology, Northeast Normal University, Changchun, Jilin Province, ChinaSchool of Information Science and Technology, Northeast Normal University, Changchun, Jilin Province, ChinaSchool of Information Science and Technology, Northeast Normal University, Changchun, Jilin Province, ChinaDepartment of Biochemistry, Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, USADepartment of Pathology and Anatomical Sciences, University of Missouri, Columbia, USADepartment of Health Management and Informatics, University of Missouri, Columbia, USADepartment of Electrical Engineer and Computer Science, Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, USAThe biomedical literature is a vast and invaluable resource for biomedical research. Integrating knowledge from the literature with biomedical data can help biological studies and the clinical decision-making process. Efforts have been made to gather information from the biomedical literature and create biomedical knowledge bases, such as KEGG and Reactome. However, manual curation remains the primary method to retrieve accurate biomedical entities and relationships. Manual curation becomes increasingly challenging and costly as the volume of biomedical publications quickly grows. Fortunately, recent advancements in Artificial Intelligence (AI) technologies offer the potential to automate the process of curating, updating, and integrating knowledge from the literature. Herein, we highlight the AI capabilities to aid in mining knowledge and building the knowledge base from the biomedical literature.https://doi.org/10.1515/mr-2023-0011artificial intelligence technologiesbiomedical literature miningpathway figure miningtext mining
spellingShingle He Fei
Liu Kai
Yang Zhiyuan
Hannink Mark
Hammer Richard D.
Popescu Mihail
Xu Dong
Applications of cutting-edge artificial intelligence technologies in biomedical literature and document mining
Medical Review
artificial intelligence technologies
biomedical literature mining
pathway figure mining
text mining
title Applications of cutting-edge artificial intelligence technologies in biomedical literature and document mining
title_full Applications of cutting-edge artificial intelligence technologies in biomedical literature and document mining
title_fullStr Applications of cutting-edge artificial intelligence technologies in biomedical literature and document mining
title_full_unstemmed Applications of cutting-edge artificial intelligence technologies in biomedical literature and document mining
title_short Applications of cutting-edge artificial intelligence technologies in biomedical literature and document mining
title_sort applications of cutting edge artificial intelligence technologies in biomedical literature and document mining
topic artificial intelligence technologies
biomedical literature mining
pathway figure mining
text mining
url https://doi.org/10.1515/mr-2023-0011
work_keys_str_mv AT hefei applicationsofcuttingedgeartificialintelligencetechnologiesinbiomedicalliteratureanddocumentmining
AT liukai applicationsofcuttingedgeartificialintelligencetechnologiesinbiomedicalliteratureanddocumentmining
AT yangzhiyuan applicationsofcuttingedgeartificialintelligencetechnologiesinbiomedicalliteratureanddocumentmining
AT hanninkmark applicationsofcuttingedgeartificialintelligencetechnologiesinbiomedicalliteratureanddocumentmining
AT hammerrichardd applicationsofcuttingedgeartificialintelligencetechnologiesinbiomedicalliteratureanddocumentmining
AT popescumihail applicationsofcuttingedgeartificialintelligencetechnologiesinbiomedicalliteratureanddocumentmining
AT xudong applicationsofcuttingedgeartificialintelligencetechnologiesinbiomedicalliteratureanddocumentmining