Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits
Mycorrhizal symbioses have evolved repeatedly in diverse fungal lineages. A large phylogenomic analysis sheds light on genomic changes associated with transitions from saprotrophy to symbiosis, including divergent genetic innovations underlying the convergent origins of the ectomycorrhizal guild.
| Main Authors: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Nature Portfolio
2020-10-01
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| Series: | Nature Communications |
| Online Access: | https://doi.org/10.1038/s41467-020-18795-w |
| _version_ | 1819289816690327552 |
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| author | Shingo Miyauchi Enikő Kiss Alan Kuo Elodie Drula Annegret Kohler Marisol Sánchez-García Emmanuelle Morin Bill Andreopoulos Kerrie W. Barry Gregory Bonito Marc Buée Akiko Carver Cindy Chen Nicolas Cichocki Alicia Clum David Culley Pedro W. Crous Laure Fauchery Mariangela Girlanda Richard D. Hayes Zsófia Kéri Kurt LaButti Anna Lipzen Vincent Lombard Jon Magnuson François Maillard Claude Murat Matt Nolan Robin A. Ohm Jasmyn Pangilinan Maíra de Freitas Pereira Silvia Perotto Martina Peter Stephanie Pfister Robert Riley Yaron Sitrit J. Benjamin Stielow Gergely Szöllősi Lucia Žifčáková Martina Štursová Joseph W. Spatafora Leho Tedersoo Lu-Min Vaario Akiyoshi Yamada Mi Yan Pengfei Wang Jianping Xu Tom Bruns Petr Baldrian Rytas Vilgalys Christophe Dunand Bernard Henrissat Igor V. Grigoriev David Hibbett László G. Nagy Francis M. Martin |
| author_facet | Shingo Miyauchi Enikő Kiss Alan Kuo Elodie Drula Annegret Kohler Marisol Sánchez-García Emmanuelle Morin Bill Andreopoulos Kerrie W. Barry Gregory Bonito Marc Buée Akiko Carver Cindy Chen Nicolas Cichocki Alicia Clum David Culley Pedro W. Crous Laure Fauchery Mariangela Girlanda Richard D. Hayes Zsófia Kéri Kurt LaButti Anna Lipzen Vincent Lombard Jon Magnuson François Maillard Claude Murat Matt Nolan Robin A. Ohm Jasmyn Pangilinan Maíra de Freitas Pereira Silvia Perotto Martina Peter Stephanie Pfister Robert Riley Yaron Sitrit J. Benjamin Stielow Gergely Szöllősi Lucia Žifčáková Martina Štursová Joseph W. Spatafora Leho Tedersoo Lu-Min Vaario Akiyoshi Yamada Mi Yan Pengfei Wang Jianping Xu Tom Bruns Petr Baldrian Rytas Vilgalys Christophe Dunand Bernard Henrissat Igor V. Grigoriev David Hibbett László G. Nagy Francis M. Martin |
| author_sort | Shingo Miyauchi |
| collection | DOAJ |
| description | Mycorrhizal symbioses have evolved repeatedly in diverse fungal lineages. A large phylogenomic analysis sheds light on genomic changes associated with transitions from saprotrophy to symbiosis, including divergent genetic innovations underlying the convergent origins of the ectomycorrhizal guild. |
| first_indexed | 2024-12-24T03:12:52Z |
| format | Article |
| id | doaj.art-3b590b5be4d447b18b8a203b8982f8ac |
| institution | Directory Open Access Journal |
| issn | 2041-1723 |
| language | English |
| last_indexed | 2024-12-24T03:12:52Z |
| publishDate | 2020-10-01 |
| publisher | Nature Portfolio |
| record_format | Article |
| series | Nature Communications |
| spelling | doaj.art-3b590b5be4d447b18b8a203b8982f8ac2022-12-21T17:17:43ZengNature PortfolioNature Communications2041-17232020-10-0111111710.1038/s41467-020-18795-wLarge-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traitsShingo Miyauchi0Enikő Kiss1Alan Kuo2Elodie Drula3Annegret Kohler4Marisol Sánchez-García5Emmanuelle Morin6Bill Andreopoulos7Kerrie W. Barry8Gregory Bonito9Marc Buée10Akiko Carver11Cindy Chen12Nicolas Cichocki13Alicia Clum14David Culley15Pedro W. Crous16Laure Fauchery17Mariangela Girlanda18Richard D. Hayes19Zsófia Kéri20Kurt LaButti21Anna Lipzen22Vincent Lombard23Jon Magnuson24François Maillard25Claude Murat26Matt Nolan27Robin A. Ohm28Jasmyn Pangilinan29Maíra de Freitas Pereira30Silvia Perotto31Martina Peter32Stephanie Pfister33Robert Riley34Yaron Sitrit35J. Benjamin Stielow36Gergely Szöllősi37Lucia Žifčáková38Martina Štursová39Joseph W. Spatafora40Leho Tedersoo41Lu-Min Vaario42Akiyoshi Yamada43Mi Yan44Pengfei Wang45Jianping Xu46Tom Bruns47Petr Baldrian48Rytas Vilgalys49Christophe Dunand50Bernard Henrissat51Igor V. Grigoriev52David Hibbett53László G. Nagy54Francis M. Martin55Université de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-NancySynthetic and Systems Biology Unit, Biological Research CentreUS Department of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryINRAE, USC1408 Architecture et Fonction des Macromolécules BiologiquesUniversité de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-NancyBiology Department, Clark University, Lasry Center for BioscienceUniversité de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-NancyUS Department of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryUS Department of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryPlant Soil and Microbial Sciences, Michigan State UniversityUniversité de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-NancyUS Department of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryUS Department of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryUniversité de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-NancyUS Department of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryChemical & Biological Processes Development Group, Pacific Northwest National LaboratoryWesterdijk Fungal Biodiversity InstituteUniversité de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-NancyDepartment of Life Sciences and Systems Biology, University of TorinoUS Department of Energy Joint Genome Institute, Lawrence Berkeley National LaboratorySynthetic and Systems Biology Unit, Biological Research CentreUS Department of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryUS Department of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryINRAE, USC1408 Architecture et Fonction des Macromolécules BiologiquesChemical & Biological Processes Development Group, Pacific Northwest National LaboratoryUniversité de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-NancyUniversité de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-NancyUS Department of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryUS Department of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryUS Department of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryUniversité de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-NancyDepartment of Life Sciences and Systems Biology, University of TorinoSwiss Federal Institute for Forest, Snow and Landscape Research WSLSwiss Federal Institute for Forest, Snow and Landscape Research WSLUS Department of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryThe Jacob Blaustein Institutes for Desert Research, Bergman Campus, Ben-Gurion University of The NegevWesterdijk Fungal Biodiversity InstituteSynthetic and Systems Biology Unit, Biological Research CentreLaboratory of Environmental Microbiology, Institute of Microbiology of the Czech Academy of SciencesLaboratory of Environmental Microbiology, Institute of Microbiology of the Czech Academy of SciencesDepartment Botany & Plant Pathology, Oregon State UniversityNatural History Museum, University of TartuDepartment of Forest Sciences, University of HelsinkiInstitute of Mountain Science, Faculty of Agriculture, Shinshu University, Minami-minowa, Kami-inaUS Department of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryDepartment of Key Laboratory, The 2nd Affiliated Hospital of Kunming Medical UniversityDepartment of Biology, McMaster UniversityDepartment of Plant and Microbial Biology, University of California – BerkeleyLaboratory of Environmental Microbiology, Institute of Microbiology of the Czech Academy of SciencesDepartment of Biology, Duke UniversityLaboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, UPSINRAE, USC1408 Architecture et Fonction des Macromolécules BiologiquesUS Department of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryBiology Department, Clark University, Lasry Center for BioscienceSynthetic and Systems Biology Unit, Biological Research CentreUniversité de Lorraine, Institut national de recherche pour l’agriculture, l’alimentation et l’ environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-NancyMycorrhizal symbioses have evolved repeatedly in diverse fungal lineages. A large phylogenomic analysis sheds light on genomic changes associated with transitions from saprotrophy to symbiosis, including divergent genetic innovations underlying the convergent origins of the ectomycorrhizal guild.https://doi.org/10.1038/s41467-020-18795-w |
| spellingShingle | Shingo Miyauchi Enikő Kiss Alan Kuo Elodie Drula Annegret Kohler Marisol Sánchez-García Emmanuelle Morin Bill Andreopoulos Kerrie W. Barry Gregory Bonito Marc Buée Akiko Carver Cindy Chen Nicolas Cichocki Alicia Clum David Culley Pedro W. Crous Laure Fauchery Mariangela Girlanda Richard D. Hayes Zsófia Kéri Kurt LaButti Anna Lipzen Vincent Lombard Jon Magnuson François Maillard Claude Murat Matt Nolan Robin A. Ohm Jasmyn Pangilinan Maíra de Freitas Pereira Silvia Perotto Martina Peter Stephanie Pfister Robert Riley Yaron Sitrit J. Benjamin Stielow Gergely Szöllősi Lucia Žifčáková Martina Štursová Joseph W. Spatafora Leho Tedersoo Lu-Min Vaario Akiyoshi Yamada Mi Yan Pengfei Wang Jianping Xu Tom Bruns Petr Baldrian Rytas Vilgalys Christophe Dunand Bernard Henrissat Igor V. Grigoriev David Hibbett László G. Nagy Francis M. Martin Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits Nature Communications |
| title | Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits |
| title_full | Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits |
| title_fullStr | Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits |
| title_full_unstemmed | Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits |
| title_short | Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits |
| title_sort | large scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits |
| url | https://doi.org/10.1038/s41467-020-18795-w |
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