Promoter-specific changes in initiation, elongation, and homeostasis of histone H3 acetylation during CBP/p300 inhibition

Regulation of RNA polymerase II (Pol2) elongation in the promoter-proximal region is an important and ubiquitous control point for gene expression in metazoans. We report that transcription of the adenovirus 5 E4 region is regulated during the release of paused Pol2 into productive elongation by rec...

Full description

Bibliographic Details
Main Authors: Emily Hsu, Nathan R Zemke, Arnold J Berk
Format: Article
Language:English
Published: eLife Sciences Publications Ltd 2021-03-01
Series:eLife
Subjects:
Online Access:https://elifesciences.org/articles/63512
_version_ 1811200022551724032
author Emily Hsu
Nathan R Zemke
Arnold J Berk
author_facet Emily Hsu
Nathan R Zemke
Arnold J Berk
author_sort Emily Hsu
collection DOAJ
description Regulation of RNA polymerase II (Pol2) elongation in the promoter-proximal region is an important and ubiquitous control point for gene expression in metazoans. We report that transcription of the adenovirus 5 E4 region is regulated during the release of paused Pol2 into productive elongation by recruitment of the super-elongation complex, dependent on promoter H3K18/27 acetylation by CBP/p300. We also establish that this is a general transcriptional regulatory mechanism that applies to ~7% of expressed protein-coding genes in primary human airway epithelial cells. We observed that a homeostatic mechanism maintains promoter, but not enhancer, H3K18/27ac in response to extensive inhibition of CBP/p300 acetyl transferase activity by the highly specific small molecule inhibitor A-485. Further, our results suggest a function for BRD4 association at enhancers in regulating paused Pol2 release at nearby promoters. Taken together, our results uncover the processes regulating transcriptional elongation by promoter region histone H3 acetylation and homeostatic maintenance of promoter, but not enhancer, H3K18/27ac in response to inhibition of CBP/p300 acetyl transferase activity.
first_indexed 2024-04-12T01:56:50Z
format Article
id doaj.art-3b7ab3a331a741e2a3d39d4b70dd79c1
institution Directory Open Access Journal
issn 2050-084X
language English
last_indexed 2024-04-12T01:56:50Z
publishDate 2021-03-01
publisher eLife Sciences Publications Ltd
record_format Article
series eLife
spelling doaj.art-3b7ab3a331a741e2a3d39d4b70dd79c12022-12-22T03:52:46ZengeLife Sciences Publications LtdeLife2050-084X2021-03-011010.7554/eLife.63512Promoter-specific changes in initiation, elongation, and homeostasis of histone H3 acetylation during CBP/p300 inhibitionEmily Hsu0https://orcid.org/0000-0001-5096-0745Nathan R Zemke1https://orcid.org/0000-0002-6326-5925Arnold J Berk2https://orcid.org/0000-0001-9379-6287Molecular Biology Institute, UCLA, Los Angeles, United StatesMolecular Biology Institute, UCLA, Los Angeles, United StatesMolecular Biology Institute, UCLA, Los Angeles, United States; Department of Microbiology, UCLA, Los Angeles, United StatesRegulation of RNA polymerase II (Pol2) elongation in the promoter-proximal region is an important and ubiquitous control point for gene expression in metazoans. We report that transcription of the adenovirus 5 E4 region is regulated during the release of paused Pol2 into productive elongation by recruitment of the super-elongation complex, dependent on promoter H3K18/27 acetylation by CBP/p300. We also establish that this is a general transcriptional regulatory mechanism that applies to ~7% of expressed protein-coding genes in primary human airway epithelial cells. We observed that a homeostatic mechanism maintains promoter, but not enhancer, H3K18/27ac in response to extensive inhibition of CBP/p300 acetyl transferase activity by the highly specific small molecule inhibitor A-485. Further, our results suggest a function for BRD4 association at enhancers in regulating paused Pol2 release at nearby promoters. Taken together, our results uncover the processes regulating transcriptional elongation by promoter region histone H3 acetylation and homeostatic maintenance of promoter, but not enhancer, H3K18/27ac in response to inhibition of CBP/p300 acetyl transferase activity.https://elifesciences.org/articles/63512adenoviruschromatintranscription
spellingShingle Emily Hsu
Nathan R Zemke
Arnold J Berk
Promoter-specific changes in initiation, elongation, and homeostasis of histone H3 acetylation during CBP/p300 inhibition
eLife
adenovirus
chromatin
transcription
title Promoter-specific changes in initiation, elongation, and homeostasis of histone H3 acetylation during CBP/p300 inhibition
title_full Promoter-specific changes in initiation, elongation, and homeostasis of histone H3 acetylation during CBP/p300 inhibition
title_fullStr Promoter-specific changes in initiation, elongation, and homeostasis of histone H3 acetylation during CBP/p300 inhibition
title_full_unstemmed Promoter-specific changes in initiation, elongation, and homeostasis of histone H3 acetylation during CBP/p300 inhibition
title_short Promoter-specific changes in initiation, elongation, and homeostasis of histone H3 acetylation during CBP/p300 inhibition
title_sort promoter specific changes in initiation elongation and homeostasis of histone h3 acetylation during cbp p300 inhibition
topic adenovirus
chromatin
transcription
url https://elifesciences.org/articles/63512
work_keys_str_mv AT emilyhsu promoterspecificchangesininitiationelongationandhomeostasisofhistoneh3acetylationduringcbpp300inhibition
AT nathanrzemke promoterspecificchangesininitiationelongationandhomeostasisofhistoneh3acetylationduringcbpp300inhibition
AT arnoldjberk promoterspecificchangesininitiationelongationandhomeostasisofhistoneh3acetylationduringcbpp300inhibition