The complete chloroplast genome sequence of Lycium ruthenicum (Solanaceae), a traditional medicinal plant in China
Lycium ruthenicum, Known as a traditional medicinal plant in China, is distributed in the arid and semiarid areas of northwest China. In this study, we assembled the complete chloroplast (cp) genome of L. ruthenicum using data from high-throughput Illumina sequencing. The L. ruthenicum cp genome is...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1638324 |
| _version_ | 1797639766278144000 |
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| author | Cuiping Wang Guolun Jia Lizhen Zhu Fang Tian |
| author_facet | Cuiping Wang Guolun Jia Lizhen Zhu Fang Tian |
| author_sort | Cuiping Wang |
| collection | DOAJ |
| description | Lycium ruthenicum, Known as a traditional medicinal plant in China, is distributed in the arid and semiarid areas of northwest China. In this study, we assembled the complete chloroplast (cp) genome of L. ruthenicum using data from high-throughput Illumina sequencing. The L. ruthenicum cp genome is 154,979 bp in size and includes two inverted repeat regions of 25,395 bp each, which is separated by a large single copy region of 85,984 bp and a small single copy region of 18,205 bp. A total of 132 genes were predicted, including 37 tRNA, 8 rRNA, and 86 protein-coding genes. In addition, 9 PCG genes possess a single intron, 74 PCG genes no intron, and 3 other genes harbor two introns. 6 tRNA genes harbor a single intron. Phylogenetic analysis placed L. ruthenicum within the Solanaceae. |
| first_indexed | 2024-03-11T13:21:24Z |
| format | Article |
| id | doaj.art-3bacd3785d9c4076a7b403d5de212473 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:21:24Z |
| publishDate | 2019-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-3bacd3785d9c4076a7b403d5de2124732023-11-03T10:28:35ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-07-01422495249610.1080/23802359.2019.16383241638324The complete chloroplast genome sequence of Lycium ruthenicum (Solanaceae), a traditional medicinal plant in ChinaCuiping Wang0Guolun Jia1Lizhen Zhu2Fang Tian3Ningxia Forestry InstituteNorthwest UniversityNingxia Forestry InstituteNingxia Forestry InstituteLycium ruthenicum, Known as a traditional medicinal plant in China, is distributed in the arid and semiarid areas of northwest China. In this study, we assembled the complete chloroplast (cp) genome of L. ruthenicum using data from high-throughput Illumina sequencing. The L. ruthenicum cp genome is 154,979 bp in size and includes two inverted repeat regions of 25,395 bp each, which is separated by a large single copy region of 85,984 bp and a small single copy region of 18,205 bp. A total of 132 genes were predicted, including 37 tRNA, 8 rRNA, and 86 protein-coding genes. In addition, 9 PCG genes possess a single intron, 74 PCG genes no intron, and 3 other genes harbor two introns. 6 tRNA genes harbor a single intron. Phylogenetic analysis placed L. ruthenicum within the Solanaceae.http://dx.doi.org/10.1080/23802359.2019.1638324lycium ruthenicumsolanaceaechloroplast genomeillumina sequencingphylogenetic analysis |
| spellingShingle | Cuiping Wang Guolun Jia Lizhen Zhu Fang Tian The complete chloroplast genome sequence of Lycium ruthenicum (Solanaceae), a traditional medicinal plant in China Mitochondrial DNA. Part B. Resources lycium ruthenicum solanaceae chloroplast genome illumina sequencing phylogenetic analysis |
| title | The complete chloroplast genome sequence of Lycium ruthenicum (Solanaceae), a traditional medicinal plant in China |
| title_full | The complete chloroplast genome sequence of Lycium ruthenicum (Solanaceae), a traditional medicinal plant in China |
| title_fullStr | The complete chloroplast genome sequence of Lycium ruthenicum (Solanaceae), a traditional medicinal plant in China |
| title_full_unstemmed | The complete chloroplast genome sequence of Lycium ruthenicum (Solanaceae), a traditional medicinal plant in China |
| title_short | The complete chloroplast genome sequence of Lycium ruthenicum (Solanaceae), a traditional medicinal plant in China |
| title_sort | complete chloroplast genome sequence of lycium ruthenicum solanaceae a traditional medicinal plant in china |
| topic | lycium ruthenicum solanaceae chloroplast genome illumina sequencing phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2019.1638324 |
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