Complete mitochondrial genome of Geoemyda spengleri
In this study, we determined the complete mitochondrial genome of Geoemyda spengleri. The genome was 17,448bp in length and contained 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and 1 main non-coding regions. The overall base composition of G. spengleri is A 33.67%, T 27.6...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1805372 |
| _version_ | 1797639062063939584 |
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| author | Bo Zhao Handong Wang Jinghong He Peter Mrope Yi Mu |
| author_facet | Bo Zhao Handong Wang Jinghong He Peter Mrope Yi Mu |
| author_sort | Bo Zhao |
| collection | DOAJ |
| description | In this study, we determined the complete mitochondrial genome of Geoemyda spengleri. The genome was 17,448bp in length and contained 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and 1 main non-coding regions. The overall base composition of G. spengleri is A 33.67%, T 27.64%, C 25.56%, and G 13.14%, with a highly A + T bias of 61.31%. Here, we describe a phylogenetic analysis of 16 species of Tesudines based on the complete mitochondrial genome, the result showed that G. japonica is most closely related to G. spengleri. This mitogenome sequence data would play an important role in the investigation of phylogenetic relationship, taxonomic resolution and phylogeography of the Tesudines. |
| first_indexed | 2024-03-11T13:12:26Z |
| format | Article |
| id | doaj.art-3bc82f22792e4fa7ba086f65528abdd3 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:12:26Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-3bc82f22792e4fa7ba086f65528abdd32023-11-03T14:00:32ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01533146314810.1080/23802359.2020.18053721805372Complete mitochondrial genome of Geoemyda spengleriBo Zhao0Handong Wang1Jinghong He2Peter Mrope3Yi Mu4College of Fisheries, Zhejiang Ocean UniversityCollege of Fisheries, Zhejiang Ocean UniversityCollege of Fisheries, Zhejiang Ocean UniversityCollege of Fisheries, Zhejiang Ocean UniversityCollege of Fisheries, Zhejiang Ocean UniversityIn this study, we determined the complete mitochondrial genome of Geoemyda spengleri. The genome was 17,448bp in length and contained 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and 1 main non-coding regions. The overall base composition of G. spengleri is A 33.67%, T 27.64%, C 25.56%, and G 13.14%, with a highly A + T bias of 61.31%. Here, we describe a phylogenetic analysis of 16 species of Tesudines based on the complete mitochondrial genome, the result showed that G. japonica is most closely related to G. spengleri. This mitogenome sequence data would play an important role in the investigation of phylogenetic relationship, taxonomic resolution and phylogeography of the Tesudines.http://dx.doi.org/10.1080/23802359.2020.1805372mitochondrial genomegeoemyda spengleriphylogenetic tree |
| spellingShingle | Bo Zhao Handong Wang Jinghong He Peter Mrope Yi Mu Complete mitochondrial genome of Geoemyda spengleri Mitochondrial DNA. Part B. Resources mitochondrial genome geoemyda spengleri phylogenetic tree |
| title | Complete mitochondrial genome of Geoemyda spengleri |
| title_full | Complete mitochondrial genome of Geoemyda spengleri |
| title_fullStr | Complete mitochondrial genome of Geoemyda spengleri |
| title_full_unstemmed | Complete mitochondrial genome of Geoemyda spengleri |
| title_short | Complete mitochondrial genome of Geoemyda spengleri |
| title_sort | complete mitochondrial genome of geoemyda spengleri |
| topic | mitochondrial genome geoemyda spengleri phylogenetic tree |
| url | http://dx.doi.org/10.1080/23802359.2020.1805372 |
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