A novel C-terminal domain of RecJ is critical for interaction with HerA in Deinococcus radiodurans

Homologous recombination (HR) generates error-free repair products, which plays an important role in double strand break repair and replication fork rescue processes. DNA end resection, the critical step in HR, is usually performed by a series of nuclease/helicase. RecJ was identified as a 5’-3’ exo...

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Main Authors: Kaiying eCheng, Ye eZhao, Xuanyi eChen, Tao eLi, Liangyan eWang, Hong eXu, Bing eTian, Yuejin eHua
Format: Article
Language:English
Published: Frontiers Media S.A. 2015-11-01
Series:Frontiers in Microbiology
Subjects:
Online Access:http://journal.frontiersin.org/Journal/10.3389/fmicb.2015.01302/full
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author Kaiying eCheng
Ye eZhao
Xuanyi eChen
Tao eLi
Liangyan eWang
Hong eXu
Bing eTian
Yuejin eHua
author_facet Kaiying eCheng
Ye eZhao
Xuanyi eChen
Tao eLi
Liangyan eWang
Hong eXu
Bing eTian
Yuejin eHua
author_sort Kaiying eCheng
collection DOAJ
description Homologous recombination (HR) generates error-free repair products, which plays an important role in double strand break repair and replication fork rescue processes. DNA end resection, the critical step in HR, is usually performed by a series of nuclease/helicase. RecJ was identified as a 5’-3’ exonuclease involved in bacterial DNA end resection. Typical RecJ possesses a conserved DHH domain, a DHHA1 domain, and an oligonucleotide/oligosaccharide-binding (OB) fold. However, RecJs from Deinococcus-Thermus phylum, such as Deinococcus radiodurans RecJ (DrRecJ), possess an extra C-terminal domain (CTD), of which the function has not been characterized. Here, we showed that a CTD-deletion of DrRecJ (DrRecJΔC) could not restore drrecJ mutant growth and mitomycin C (MMC)-sensitive phenotypes, indicating that this domain is essential for DrRecJ in vivo. DrRecJΔC displayed reduced DNA nuclease activity and DNA binding ability. Direct interaction was identified between DrRecJ-CTD and DrHerA, which stimulates DrRecJ nuclease activity by enhancing its DNA binding affinity. Moreover, DrNurA nuclease, another partner of DrHerA, inhibited the stimulation of DrHerA on DrRecJ nuclease activity by interaction with DrHerA. Opposing growth and MMC-resistance phenotypes between the recJ and nurA mutants were observed. A novel modulation mechanism among DrRecJ, DrHerA, and DrNurA was also suggested.
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spelling doaj.art-3c111e7b491c4d4bbcee3375439889602022-12-21T17:16:44ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2015-11-01610.3389/fmicb.2015.01302156386A novel C-terminal domain of RecJ is critical for interaction with HerA in Deinococcus radioduransKaiying eCheng0Ye eZhao1Xuanyi eChen2Tao eLi3Liangyan eWang4Hong eXu5Bing eTian6Yuejin eHua7Key Laboratory of Chinese Ministry of Agriculture for Nuclear-Agricultural Sciences, Institute of Nuclear-Agricultural Sciences, Zhejiang UniversityKey Laboratory of Chinese Ministry of Agriculture for Nuclear-Agricultural Sciences, Institute of Nuclear-Agricultural Sciences, Zhejiang UniversityKey Laboratory of Chinese Ministry of Agriculture for Nuclear-Agricultural Sciences, Institute of Nuclear-Agricultural Sciences, Zhejiang UniversityKey Laboratory of Chinese Ministry of Agriculture for Nuclear-Agricultural Sciences, Institute of Nuclear-Agricultural Sciences, Zhejiang UniversityKey Laboratory of Chinese Ministry of Agriculture for Nuclear-Agricultural Sciences, Institute of Nuclear-Agricultural Sciences, Zhejiang UniversityKey Laboratory of Chinese Ministry of Agriculture for Nuclear-Agricultural Sciences, Institute of Nuclear-Agricultural Sciences, Zhejiang UniversityKey Laboratory of Chinese Ministry of Agriculture for Nuclear-Agricultural Sciences, Institute of Nuclear-Agricultural Sciences, Zhejiang UniversityKey Laboratory of Chinese Ministry of Agriculture for Nuclear-Agricultural Sciences, Institute of Nuclear-Agricultural Sciences, Zhejiang UniversityHomologous recombination (HR) generates error-free repair products, which plays an important role in double strand break repair and replication fork rescue processes. DNA end resection, the critical step in HR, is usually performed by a series of nuclease/helicase. RecJ was identified as a 5’-3’ exonuclease involved in bacterial DNA end resection. Typical RecJ possesses a conserved DHH domain, a DHHA1 domain, and an oligonucleotide/oligosaccharide-binding (OB) fold. However, RecJs from Deinococcus-Thermus phylum, such as Deinococcus radiodurans RecJ (DrRecJ), possess an extra C-terminal domain (CTD), of which the function has not been characterized. Here, we showed that a CTD-deletion of DrRecJ (DrRecJΔC) could not restore drrecJ mutant growth and mitomycin C (MMC)-sensitive phenotypes, indicating that this domain is essential for DrRecJ in vivo. DrRecJΔC displayed reduced DNA nuclease activity and DNA binding ability. Direct interaction was identified between DrRecJ-CTD and DrHerA, which stimulates DrRecJ nuclease activity by enhancing its DNA binding affinity. Moreover, DrNurA nuclease, another partner of DrHerA, inhibited the stimulation of DrHerA on DrRecJ nuclease activity by interaction with DrHerA. Opposing growth and MMC-resistance phenotypes between the recJ and nurA mutants were observed. A novel modulation mechanism among DrRecJ, DrHerA, and DrNurA was also suggested.http://journal.frontiersin.org/Journal/10.3389/fmicb.2015.01302/fullDNA Repairprotein-protein interactionDeinococcus radioduransHERADNA end resectionRecJ
spellingShingle Kaiying eCheng
Ye eZhao
Xuanyi eChen
Tao eLi
Liangyan eWang
Hong eXu
Bing eTian
Yuejin eHua
A novel C-terminal domain of RecJ is critical for interaction with HerA in Deinococcus radiodurans
Frontiers in Microbiology
DNA Repair
protein-protein interaction
Deinococcus radiodurans
HERA
DNA end resection
RecJ
title A novel C-terminal domain of RecJ is critical for interaction with HerA in Deinococcus radiodurans
title_full A novel C-terminal domain of RecJ is critical for interaction with HerA in Deinococcus radiodurans
title_fullStr A novel C-terminal domain of RecJ is critical for interaction with HerA in Deinococcus radiodurans
title_full_unstemmed A novel C-terminal domain of RecJ is critical for interaction with HerA in Deinococcus radiodurans
title_short A novel C-terminal domain of RecJ is critical for interaction with HerA in Deinococcus radiodurans
title_sort novel c terminal domain of recj is critical for interaction with hera in deinococcus radiodurans
topic DNA Repair
protein-protein interaction
Deinococcus radiodurans
HERA
DNA end resection
RecJ
url http://journal.frontiersin.org/Journal/10.3389/fmicb.2015.01302/full
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