Analysis of <i>WAK</i> Genes in Nine Cruciferous Species with a Focus on <i>Brassica napus</i> L.
The wall-associated kinase family contributes to plant cell elongation and pathogen recognition. Nine Cruciferous species were studied for identification and molecular evolution of the <i>WAK</i> gene family. Firstly, 178 <i>WAK</i> genes were identified. A phylogenetic tree...
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MDPI AG
2023-09-01
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| Series: | International Journal of Molecular Sciences |
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| Online Access: | https://www.mdpi.com/1422-0067/24/17/13601 |
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| author | Zishu Xu Yi Duan Hui Liu Mingchao Xu Zhi Zhang Ling Xu |
| author_facet | Zishu Xu Yi Duan Hui Liu Mingchao Xu Zhi Zhang Ling Xu |
| author_sort | Zishu Xu |
| collection | DOAJ |
| description | The wall-associated kinase family contributes to plant cell elongation and pathogen recognition. Nine Cruciferous species were studied for identification and molecular evolution of the <i>WAK</i> gene family. Firstly, 178 <i>WAK</i> genes were identified. A phylogenetic tree was constructed of the Cruciferous <i>WAK</i> proteins into four categories, of which the <i>Brassica rapa</i>, <i>Brassica oleracea</i> and <i>Brassica napus</i> genes in the U’s triangle were more closely related. The <i>WAK</i> gene family was unevenly distributed in <i>B. napus</i> chromosomal imaging, with the largest number of <i>BnWAK</i> genes located on chromosome C08. In the expression analysis, the expression patterns of the <i>WAK</i> gene family varied under different stress treatments, and some members of <i>BnWAK</i>s were significantly different under stress treatments. This study lays a foundation for further revealing the functional mechanisms of the <i>WAK</i> gene family in <i>Brassica napus</i>. |
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| issn | 1661-6596 1422-0067 |
| language | English |
| last_indexed | 2024-03-10T23:20:18Z |
| publishDate | 2023-09-01 |
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| series | International Journal of Molecular Sciences |
| spelling | doaj.art-3c60836677ad424cbe266e100dd689612023-11-19T08:19:39ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672023-09-0124171360110.3390/ijms241713601Analysis of <i>WAK</i> Genes in Nine Cruciferous Species with a Focus on <i>Brassica napus</i> L.Zishu Xu0Yi Duan1Hui Liu2Mingchao Xu3Zhi Zhang4Ling Xu5Key Laboratory of Plant Secondary Metabolism and Regulation of Zhejiang Province, College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou 310018, ChinaKey Laboratory of Plant Secondary Metabolism and Regulation of Zhejiang Province, College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou 310018, ChinaUWA School of Agriculture and Environment and The UWA Institute of Agriculture, Faculty of Science, The University of Western Australia, Perth, WA 6009, AustraliaLeshan Academy of Agricultural Sciences, Leshan 614000, ChinaLeshan Academy of Agricultural Sciences, Leshan 614000, ChinaKey Laboratory of Plant Secondary Metabolism and Regulation of Zhejiang Province, College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou 310018, ChinaThe wall-associated kinase family contributes to plant cell elongation and pathogen recognition. Nine Cruciferous species were studied for identification and molecular evolution of the <i>WAK</i> gene family. Firstly, 178 <i>WAK</i> genes were identified. A phylogenetic tree was constructed of the Cruciferous <i>WAK</i> proteins into four categories, of which the <i>Brassica rapa</i>, <i>Brassica oleracea</i> and <i>Brassica napus</i> genes in the U’s triangle were more closely related. The <i>WAK</i> gene family was unevenly distributed in <i>B. napus</i> chromosomal imaging, with the largest number of <i>BnWAK</i> genes located on chromosome C08. In the expression analysis, the expression patterns of the <i>WAK</i> gene family varied under different stress treatments, and some members of <i>BnWAK</i>s were significantly different under stress treatments. This study lays a foundation for further revealing the functional mechanisms of the <i>WAK</i> gene family in <i>Brassica napus</i>.https://www.mdpi.com/1422-0067/24/17/13601<i>Brasscia napus</i> L.wall-associated kinasecruciferaeexpression profilegene familybioinformatics analysis |
| spellingShingle | Zishu Xu Yi Duan Hui Liu Mingchao Xu Zhi Zhang Ling Xu Analysis of <i>WAK</i> Genes in Nine Cruciferous Species with a Focus on <i>Brassica napus</i> L. International Journal of Molecular Sciences <i>Brasscia napus</i> L. wall-associated kinase cruciferae expression profile gene family bioinformatics analysis |
| title | Analysis of <i>WAK</i> Genes in Nine Cruciferous Species with a Focus on <i>Brassica napus</i> L. |
| title_full | Analysis of <i>WAK</i> Genes in Nine Cruciferous Species with a Focus on <i>Brassica napus</i> L. |
| title_fullStr | Analysis of <i>WAK</i> Genes in Nine Cruciferous Species with a Focus on <i>Brassica napus</i> L. |
| title_full_unstemmed | Analysis of <i>WAK</i> Genes in Nine Cruciferous Species with a Focus on <i>Brassica napus</i> L. |
| title_short | Analysis of <i>WAK</i> Genes in Nine Cruciferous Species with a Focus on <i>Brassica napus</i> L. |
| title_sort | analysis of i wak i genes in nine cruciferous species with a focus on i brassica napus i l |
| topic | <i>Brasscia napus</i> L. wall-associated kinase cruciferae expression profile gene family bioinformatics analysis |
| url | https://www.mdpi.com/1422-0067/24/17/13601 |
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