Loss of Nudt15 thiopurine detoxification increases direct DNA damage in hematopoietic stem cells

Abstract Thiopurines, such as 6-mercaptopurine (6-MP), are widely used as cytotoxic agents and immunosuppressants for leukemia and autoimmune or inflammatory diseases. A nonsynonymous single nucleotide polymorphism (p.Arg139Cys; R139C) of the nucleoside diphosphate-linked moiety X-type motif 15 (NUD...

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Main Authors: Noriaki Yamashita, Masahiro Kawahara, Takayuki Imai, Goichi Tatsumi, Ai Asai-Nishishita, Akira Andoh
Format: Article
Language:English
Published: Nature Portfolio 2023-07-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-023-38952-7
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author Noriaki Yamashita
Masahiro Kawahara
Takayuki Imai
Goichi Tatsumi
Ai Asai-Nishishita
Akira Andoh
author_facet Noriaki Yamashita
Masahiro Kawahara
Takayuki Imai
Goichi Tatsumi
Ai Asai-Nishishita
Akira Andoh
author_sort Noriaki Yamashita
collection DOAJ
description Abstract Thiopurines, such as 6-mercaptopurine (6-MP), are widely used as cytotoxic agents and immunosuppressants for leukemia and autoimmune or inflammatory diseases. A nonsynonymous single nucleotide polymorphism (p.Arg139Cys; R139C) of the nucleoside diphosphate-linked moiety X-type motif 15 (NUDT15) gene causes the loss of thiopurine detoxification, inducing myelosuppression. To understand such hematotoxicity, we investigate the effects of NUDT15 R139C on hematopoietic stem cells (HSCs) upon thiopurine administration. Using previously established Nudt15 R138C knock-in mice, which mimic myelosuppression in NUDT15 R139C homozygous or heterozygous patients following thiopurine administration, we investigated the numerical changes of HSCs and hematopoietic progenitor cells following 6-MP administration using in vivo flowcytometry and ex vivo HSC expansion. Genes differentially expressed between Nudt15 +/+ HSCs and Nudt15 R138C/R138C HSCs were identified using RNA-sequencing before the emergence of 6-MP-induced HSC-damage. Gene Ontology (GO) and Transcriptional Regulatory Relationships Unraveled by Sentence-based Text Mining (TRRUST) analyses were performed to elucidate the molecular effects of 6-MP on HSCs. In Nudt15 R138C/R138C mice, 6-MP induced exhaustion of HSCs faster than that of multipotent progenitors and as fast as that of myeloid-committed progenitors. Ex vivo-expanded Nudt15 R138C/R138C HSCs were dose- and time-dependently damaged by 6-MP. GO analysis identified the DNA damage response and cell cycle process as the most strongly influenced processes in Nudt15 R138C/R138C HSCs. TRRUST analysis revealed that the Trp53-regulated transcriptional regulatory network is influenced prior to HSC exhaustion in Nudt15 R138C/R138C HSCs. The loss of NUDT15 thiopurine detoxification enhances thiopurine-mediated DNA damage via the Trp53 networks in HSCs. Therefore, caution is required in long-term thiopurine use in patients with NUDT15 R139C in view of its adverse effects on HSCs in the form of DNA damage.
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spelling doaj.art-3c96629815534cc8a1d0fa30ceebdd8c2023-07-30T11:12:32ZengNature PortfolioScientific Reports2045-23222023-07-011311910.1038/s41598-023-38952-7Loss of Nudt15 thiopurine detoxification increases direct DNA damage in hematopoietic stem cellsNoriaki Yamashita0Masahiro Kawahara1Takayuki Imai2Goichi Tatsumi3Ai Asai-Nishishita4Akira Andoh5Division of Gastroenterology and Hematology, Department of Medicine, Shiga University of Medical ScienceDivision of Gastroenterology and Hematology, Department of Medicine, Shiga University of Medical ScienceDivision of Gastroenterology and Hematology, Department of Medicine, Shiga University of Medical ScienceDivision of Gastroenterology and Hematology, Department of Medicine, Shiga University of Medical ScienceDivision of Gastroenterology and Hematology, Department of Medicine, Shiga University of Medical ScienceDivision of Gastroenterology and Hematology, Department of Medicine, Shiga University of Medical ScienceAbstract Thiopurines, such as 6-mercaptopurine (6-MP), are widely used as cytotoxic agents and immunosuppressants for leukemia and autoimmune or inflammatory diseases. A nonsynonymous single nucleotide polymorphism (p.Arg139Cys; R139C) of the nucleoside diphosphate-linked moiety X-type motif 15 (NUDT15) gene causes the loss of thiopurine detoxification, inducing myelosuppression. To understand such hematotoxicity, we investigate the effects of NUDT15 R139C on hematopoietic stem cells (HSCs) upon thiopurine administration. Using previously established Nudt15 R138C knock-in mice, which mimic myelosuppression in NUDT15 R139C homozygous or heterozygous patients following thiopurine administration, we investigated the numerical changes of HSCs and hematopoietic progenitor cells following 6-MP administration using in vivo flowcytometry and ex vivo HSC expansion. Genes differentially expressed between Nudt15 +/+ HSCs and Nudt15 R138C/R138C HSCs were identified using RNA-sequencing before the emergence of 6-MP-induced HSC-damage. Gene Ontology (GO) and Transcriptional Regulatory Relationships Unraveled by Sentence-based Text Mining (TRRUST) analyses were performed to elucidate the molecular effects of 6-MP on HSCs. In Nudt15 R138C/R138C mice, 6-MP induced exhaustion of HSCs faster than that of multipotent progenitors and as fast as that of myeloid-committed progenitors. Ex vivo-expanded Nudt15 R138C/R138C HSCs were dose- and time-dependently damaged by 6-MP. GO analysis identified the DNA damage response and cell cycle process as the most strongly influenced processes in Nudt15 R138C/R138C HSCs. TRRUST analysis revealed that the Trp53-regulated transcriptional regulatory network is influenced prior to HSC exhaustion in Nudt15 R138C/R138C HSCs. The loss of NUDT15 thiopurine detoxification enhances thiopurine-mediated DNA damage via the Trp53 networks in HSCs. Therefore, caution is required in long-term thiopurine use in patients with NUDT15 R139C in view of its adverse effects on HSCs in the form of DNA damage.https://doi.org/10.1038/s41598-023-38952-7
spellingShingle Noriaki Yamashita
Masahiro Kawahara
Takayuki Imai
Goichi Tatsumi
Ai Asai-Nishishita
Akira Andoh
Loss of Nudt15 thiopurine detoxification increases direct DNA damage in hematopoietic stem cells
Scientific Reports
title Loss of Nudt15 thiopurine detoxification increases direct DNA damage in hematopoietic stem cells
title_full Loss of Nudt15 thiopurine detoxification increases direct DNA damage in hematopoietic stem cells
title_fullStr Loss of Nudt15 thiopurine detoxification increases direct DNA damage in hematopoietic stem cells
title_full_unstemmed Loss of Nudt15 thiopurine detoxification increases direct DNA damage in hematopoietic stem cells
title_short Loss of Nudt15 thiopurine detoxification increases direct DNA damage in hematopoietic stem cells
title_sort loss of nudt15 thiopurine detoxification increases direct dna damage in hematopoietic stem cells
url https://doi.org/10.1038/s41598-023-38952-7
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