Finding Needles in Haystacks and Inferring Their Function: Challenges and Successes in Beneficial Symbiosis Research

ABSTRACT Symbioses between hosts and beneficial microbes are key drivers of biological innovation and diversity. While a range of systems have emerged that provide foundational insights into how symbioses function and evolve, we still have a limited understanding of the vast diversity of organisms t...

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Main Authors: Gordon M. Bennett, Elizabeth Heath-Heckman, E. Maggie Sogin
Format: Article
Language:English
Published: American Society for Microbiology 2021-04-01
Series:mSystems
Subjects:
Online Access:https://journals.asm.org/doi/10.1128/mSystems.00243-21
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author Gordon M. Bennett
Elizabeth Heath-Heckman
E. Maggie Sogin
author_facet Gordon M. Bennett
Elizabeth Heath-Heckman
E. Maggie Sogin
author_sort Gordon M. Bennett
collection DOAJ
description ABSTRACT Symbioses between hosts and beneficial microbes are key drivers of biological innovation and diversity. While a range of systems have emerged that provide foundational insights into how symbioses function and evolve, we still have a limited understanding of the vast diversity of organisms that engage in such interactions. Recent advances in molecular tools, theory, and interdisciplinary approaches now permit researchers to expand our knowledge and to press forward the frontiers of symbiosis research. As described in a recent issue of mSystems, Myers and colleagues (K. N. Myers, D. Conn, and A. M. V. Brown, mSystems, 6:e01048-20, 2021, https://doi.org/10.1128/mSystems.01048-20) conducted a genome skimming approach to understand the role of obligate beneficial symbionts in plant-parasitic dagger nematodes. Nematodes are extraordinarily abundant and key players in ecosystem function and health. However, they are difficult to harness in the lab. The approach used by Myers et al. ameliorates these challenges to illustrate a relatively complete picture of a poorly understood beneficial symbiosis.
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spelling doaj.art-3caad5891b2544e6a9baf1f8b7c272702022-12-21T22:42:41ZengAmerican Society for MicrobiologymSystems2379-50772021-04-016210.1128/mSystems.00243-21Finding Needles in Haystacks and Inferring Their Function: Challenges and Successes in Beneficial Symbiosis ResearchGordon M. Bennett0Elizabeth Heath-Heckman1E. Maggie Sogin2Department of Life and Environmental Sciences, University of California Merced, Merced, California, USADepartment of Integrative Biology, Michigan State University, East Lansing, Michigan, USADepartment of Molecular and Cellular Biology, University of California Merced, Merced, California, USAABSTRACT Symbioses between hosts and beneficial microbes are key drivers of biological innovation and diversity. While a range of systems have emerged that provide foundational insights into how symbioses function and evolve, we still have a limited understanding of the vast diversity of organisms that engage in such interactions. Recent advances in molecular tools, theory, and interdisciplinary approaches now permit researchers to expand our knowledge and to press forward the frontiers of symbiosis research. As described in a recent issue of mSystems, Myers and colleagues (K. N. Myers, D. Conn, and A. M. V. Brown, mSystems, 6:e01048-20, 2021, https://doi.org/10.1128/mSystems.01048-20) conducted a genome skimming approach to understand the role of obligate beneficial symbionts in plant-parasitic dagger nematodes. Nematodes are extraordinarily abundant and key players in ecosystem function and health. However, they are difficult to harness in the lab. The approach used by Myers et al. ameliorates these challenges to illustrate a relatively complete picture of a poorly understood beneficial symbiosis.https://journals.asm.org/doi/10.1128/mSystems.00243-21agricultural pestbacteriaevolutiongenomenematodesnutrition
spellingShingle Gordon M. Bennett
Elizabeth Heath-Heckman
E. Maggie Sogin
Finding Needles in Haystacks and Inferring Their Function: Challenges and Successes in Beneficial Symbiosis Research
mSystems
agricultural pest
bacteria
evolution
genome
nematodes
nutrition
title Finding Needles in Haystacks and Inferring Their Function: Challenges and Successes in Beneficial Symbiosis Research
title_full Finding Needles in Haystacks and Inferring Their Function: Challenges and Successes in Beneficial Symbiosis Research
title_fullStr Finding Needles in Haystacks and Inferring Their Function: Challenges and Successes in Beneficial Symbiosis Research
title_full_unstemmed Finding Needles in Haystacks and Inferring Their Function: Challenges and Successes in Beneficial Symbiosis Research
title_short Finding Needles in Haystacks and Inferring Their Function: Challenges and Successes in Beneficial Symbiosis Research
title_sort finding needles in haystacks and inferring their function challenges and successes in beneficial symbiosis research
topic agricultural pest
bacteria
evolution
genome
nematodes
nutrition
url https://journals.asm.org/doi/10.1128/mSystems.00243-21
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