Evidence of Destabilization of the Human Thymidylate Synthase (hTS) Dimeric Structure Induced by the Interface Mutation Q62R

In human cells, thymidylate synthase (TS) provides the only source of 2′-deoxythymidyne-5′-monophosphate (dTMP), which is required for DNA biosynthesis. Because of its pivotal role, human TS (hTS) represents a validated target for anticancer chemotherapy. Nonetheless, the efficac...

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Main Authors: Cecilia Pozzi, Ludovica Lopresti, Matteo Santucci, Maria Paola Costi, Stefano Mangani
Format: Article
Language:English
Published: MDPI AG 2019-04-01
Series:Biomolecules
Subjects:
Online Access:https://www.mdpi.com/2218-273X/9/4/134
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author Cecilia Pozzi
Ludovica Lopresti
Matteo Santucci
Maria Paola Costi
Stefano Mangani
author_facet Cecilia Pozzi
Ludovica Lopresti
Matteo Santucci
Maria Paola Costi
Stefano Mangani
author_sort Cecilia Pozzi
collection DOAJ
description In human cells, thymidylate synthase (TS) provides the only source of 2′-deoxythymidyne-5′-monophosphate (dTMP), which is required for DNA biosynthesis. Because of its pivotal role, human TS (hTS) represents a validated target for anticancer chemotherapy. Nonetheless, the efficacy of drugs blocking the hTS active site has limitations due to the onset of resistance in cancer cells, requiring the identification of new strategies to effectively inhibit this enzyme. Human TS works as an obligate homodimer, making the inter-subunit interface an attractive targetable area. Here, we report the design and investigation of a new hTS variant, in which Gln62, located at the dimer interface, has been replaced by arginine in order to destabilize the enzyme quaternary assembly. The hTS Q62R variant has been characterized though kinetic assay, thermal denaturation analysis and X-ray crystallography. Our results provide evidence that hTS Q62R has a reduced melting temperature. The effective destabilization of the TS quaternary structure is also confirmed by structural analysis, showing that the introduced mutation induces a slight aperture of the hTS dimer. The generation of hTS variants having a more accessible interface area can facilitate the screening of interface-targeting molecules, providing key information for the rational design of innovative hTS interface inhibitors.
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spelling doaj.art-3cb5055eca254bccb497506a50bf195d2022-12-21T18:15:03ZengMDPI AGBiomolecules2218-273X2019-04-019413410.3390/biom9040134biom9040134Evidence of Destabilization of the Human Thymidylate Synthase (hTS) Dimeric Structure Induced by the Interface Mutation Q62RCecilia Pozzi0Ludovica Lopresti1Matteo Santucci2Maria Paola Costi3Stefano Mangani4Department of Biotechnology, Chemistry and Pharmacy—Department of Excellence 2018-2020, University of Siena, 53100 Siena, ItalyDepartment of Biotechnology, Chemistry and Pharmacy—Department of Excellence 2018-2020, University of Siena, 53100 Siena, ItalyDepartment of Life Sciences, University of Modena and Reggio Emilia, 41125 Modena, ItalyDepartment of Life Sciences, University of Modena and Reggio Emilia, 41125 Modena, ItalyDepartment of Biotechnology, Chemistry and Pharmacy—Department of Excellence 2018-2020, University of Siena, 53100 Siena, ItalyIn human cells, thymidylate synthase (TS) provides the only source of 2′-deoxythymidyne-5′-monophosphate (dTMP), which is required for DNA biosynthesis. Because of its pivotal role, human TS (hTS) represents a validated target for anticancer chemotherapy. Nonetheless, the efficacy of drugs blocking the hTS active site has limitations due to the onset of resistance in cancer cells, requiring the identification of new strategies to effectively inhibit this enzyme. Human TS works as an obligate homodimer, making the inter-subunit interface an attractive targetable area. Here, we report the design and investigation of a new hTS variant, in which Gln62, located at the dimer interface, has been replaced by arginine in order to destabilize the enzyme quaternary assembly. The hTS Q62R variant has been characterized though kinetic assay, thermal denaturation analysis and X-ray crystallography. Our results provide evidence that hTS Q62R has a reduced melting temperature. The effective destabilization of the TS quaternary structure is also confirmed by structural analysis, showing that the introduced mutation induces a slight aperture of the hTS dimer. The generation of hTS variants having a more accessible interface area can facilitate the screening of interface-targeting molecules, providing key information for the rational design of innovative hTS interface inhibitors.https://www.mdpi.com/2218-273X/9/4/134human thymidylate synthaseinterface variantdimer destabilizationcircular dichroismthermal stabilityX-ray crystallographysite-directed mutagenesis
spellingShingle Cecilia Pozzi
Ludovica Lopresti
Matteo Santucci
Maria Paola Costi
Stefano Mangani
Evidence of Destabilization of the Human Thymidylate Synthase (hTS) Dimeric Structure Induced by the Interface Mutation Q62R
Biomolecules
human thymidylate synthase
interface variant
dimer destabilization
circular dichroism
thermal stability
X-ray crystallography
site-directed mutagenesis
title Evidence of Destabilization of the Human Thymidylate Synthase (hTS) Dimeric Structure Induced by the Interface Mutation Q62R
title_full Evidence of Destabilization of the Human Thymidylate Synthase (hTS) Dimeric Structure Induced by the Interface Mutation Q62R
title_fullStr Evidence of Destabilization of the Human Thymidylate Synthase (hTS) Dimeric Structure Induced by the Interface Mutation Q62R
title_full_unstemmed Evidence of Destabilization of the Human Thymidylate Synthase (hTS) Dimeric Structure Induced by the Interface Mutation Q62R
title_short Evidence of Destabilization of the Human Thymidylate Synthase (hTS) Dimeric Structure Induced by the Interface Mutation Q62R
title_sort evidence of destabilization of the human thymidylate synthase hts dimeric structure induced by the interface mutation q62r
topic human thymidylate synthase
interface variant
dimer destabilization
circular dichroism
thermal stability
X-ray crystallography
site-directed mutagenesis
url https://www.mdpi.com/2218-273X/9/4/134
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