The complete chloroplast genome of Toxicodendron griffithii
The whole chloroplast (cp) genome sequence of Toxicodendron griffithii has been characterized from Illumina pair-end sequencing. The complete cp genome was 159,613 bp in length, containing a large single-copy region (LSC) of 87,722 bp and a small single-copy region (SSC) of 18,911 bp, which were sep...
| Main Authors: | , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2020-07-01
|
| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1768931 |
| _version_ | 1797639200995016704 |
|---|---|
| author | Yongjie Li Yiyun Tang Tao Wu |
| author_facet | Yongjie Li Yiyun Tang Tao Wu |
| author_sort | Yongjie Li |
| collection | DOAJ |
| description | The whole chloroplast (cp) genome sequence of Toxicodendron griffithii has been characterized from Illumina pair-end sequencing. The complete cp genome was 159,613 bp in length, containing a large single-copy region (LSC) of 87,722 bp and a small single-copy region (SSC) of 18,911 bp, which were separated by a pair of 26,490 bp inverted repeat regions (IRs). The genome contained 132 genes (113 unique), including 87 protein-coding genes (80 unique), 37 tRNA genes (29 unique), and 8 rRNA genes (4 unique). The overall GC content of T. griffithii cp genome is 37.94%. Phylogenetic analysis of 14 chloroplast genomes within the family Anacardiaceae suggests that T. griffithii is closely related to genus Rhus and genus Pistacia. |
| first_indexed | 2024-03-11T13:14:31Z |
| format | Article |
| id | doaj.art-3d832bef4456460490e9124ce968ba93 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:14:31Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-3d832bef4456460490e9124ce968ba932023-11-03T13:50:21ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01532211221210.1080/23802359.2020.17689311768931The complete chloroplast genome of Toxicodendron griffithiiYongjie Li0Yiyun Tang1Tao Wu2Institute of Economic Forest, Yunnan Academy of Forestry and GrasslandWoody Oil Industry Research Institute of Nujiang PrefectrueInstitute of Economic Forest, Yunnan Academy of Forestry and GrasslandThe whole chloroplast (cp) genome sequence of Toxicodendron griffithii has been characterized from Illumina pair-end sequencing. The complete cp genome was 159,613 bp in length, containing a large single-copy region (LSC) of 87,722 bp and a small single-copy region (SSC) of 18,911 bp, which were separated by a pair of 26,490 bp inverted repeat regions (IRs). The genome contained 132 genes (113 unique), including 87 protein-coding genes (80 unique), 37 tRNA genes (29 unique), and 8 rRNA genes (4 unique). The overall GC content of T. griffithii cp genome is 37.94%. Phylogenetic analysis of 14 chloroplast genomes within the family Anacardiaceae suggests that T. griffithii is closely related to genus Rhus and genus Pistacia.http://dx.doi.org/10.1080/23802359.2020.1768931toxicodendron griffithiichloroplast genome |
| spellingShingle | Yongjie Li Yiyun Tang Tao Wu The complete chloroplast genome of Toxicodendron griffithii Mitochondrial DNA. Part B. Resources toxicodendron griffithii chloroplast genome |
| title | The complete chloroplast genome of Toxicodendron griffithii |
| title_full | The complete chloroplast genome of Toxicodendron griffithii |
| title_fullStr | The complete chloroplast genome of Toxicodendron griffithii |
| title_full_unstemmed | The complete chloroplast genome of Toxicodendron griffithii |
| title_short | The complete chloroplast genome of Toxicodendron griffithii |
| title_sort | complete chloroplast genome of toxicodendron griffithii |
| topic | toxicodendron griffithii chloroplast genome |
| url | http://dx.doi.org/10.1080/23802359.2020.1768931 |
| work_keys_str_mv | AT yongjieli thecompletechloroplastgenomeoftoxicodendrongriffithii AT yiyuntang thecompletechloroplastgenomeoftoxicodendrongriffithii AT taowu thecompletechloroplastgenomeoftoxicodendrongriffithii AT yongjieli completechloroplastgenomeoftoxicodendrongriffithii AT yiyuntang completechloroplastgenomeoftoxicodendrongriffithii AT taowu completechloroplastgenomeoftoxicodendrongriffithii |