Complete chloroplast genome sequence of Populus pruinosa Schrenk from PacBio Sequel II Platform
Populus pruinosa Schrenk plays an important role on ecological services in desert areas. The complete chloroplast genome was reported in this study using the PacBio Sequel II Platform. The chloroplast genome with a total size of 157,856 bp consists of two inverted repeats (IR, 27,673 bp) separated b...
| Main Authors: | , , , , , , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2020-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1824593 |
| _version_ | 1797639062505390080 |
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| author | Zhong-Shuai Gai Rui Liao Zhen-Bo Jiang Pei-Pei Jiao Shan-He Zhang Rui Qin Hong Liu Zhi-Hua Wu Zhi-Jun Li |
| author_facet | Zhong-Shuai Gai Rui Liao Zhen-Bo Jiang Pei-Pei Jiao Shan-He Zhang Rui Qin Hong Liu Zhi-Hua Wu Zhi-Jun Li |
| author_sort | Zhong-Shuai Gai |
| collection | DOAJ |
| description | Populus pruinosa Schrenk plays an important role on ecological services in desert areas. The complete chloroplast genome was reported in this study using the PacBio Sequel II Platform. The chloroplast genome with a total size of 157,856 bp consists of two inverted repeats (IR, 27,673 bp) separated by a large single-copy region (LSC, 85,867 bp) and a small single-copy region (SSC, 16,645 bp). Further annotation revealed the chloroplast genome contains 111 genes, including 78 protein-coding genes, 29 tRNA genes, and 4 rRNA genes. A total of 151 simple sequence repeats (SSRs) were identified in the chloroplast genome. This information will be useful for study on the evolution and genetic diversity of P. pruinosa in the future. |
| first_indexed | 2024-03-11T13:12:26Z |
| format | Article |
| id | doaj.art-3dda38cea55b4f688c298b1b57577b43 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:12:26Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-3dda38cea55b4f688c298b1b57577b432023-11-03T14:00:33ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01533452345410.1080/23802359.2020.18245931824593Complete chloroplast genome sequence of Populus pruinosa Schrenk from PacBio Sequel II PlatformZhong-Shuai Gai0Rui Liao1Zhen-Bo Jiang2Pei-Pei Jiao3Shan-He Zhang4Rui Qin5Hong Liu6Zhi-Hua Wu7Zhi-Jun Li8Key Laboratory of Protection and Utilization of Biological Resources in Tarim Basin Xinjiang Production and Construction Corps, Tarim UniversityHubei Provincial Key Laboratory for Protection and Application of Special Plant Germplasm in Wuling Area of China & Key Laboratory of State Ethnic Affairs Commission for Biological Technology, College of Life Sciences, South-Central University for NationalitiesKey Laboratory of Protection and Utilization of Biological Resources in Tarim Basin Xinjiang Production and Construction Corps, Tarim UniversityKey Laboratory of Protection and Utilization of Biological Resources in Tarim Basin Xinjiang Production and Construction Corps, Tarim UniversityKey Laboratory of Protection and Utilization of Biological Resources in Tarim Basin Xinjiang Production and Construction Corps, Tarim UniversityHubei Provincial Key Laboratory for Protection and Application of Special Plant Germplasm in Wuling Area of China & Key Laboratory of State Ethnic Affairs Commission for Biological Technology, College of Life Sciences, South-Central University for NationalitiesHubei Provincial Key Laboratory for Protection and Application of Special Plant Germplasm in Wuling Area of China & Key Laboratory of State Ethnic Affairs Commission for Biological Technology, College of Life Sciences, South-Central University for NationalitiesKey Laboratory of Protection and Utilization of Biological Resources in Tarim Basin Xinjiang Production and Construction Corps, Tarim UniversityKey Laboratory of Protection and Utilization of Biological Resources in Tarim Basin Xinjiang Production and Construction Corps, Tarim UniversityPopulus pruinosa Schrenk plays an important role on ecological services in desert areas. The complete chloroplast genome was reported in this study using the PacBio Sequel II Platform. The chloroplast genome with a total size of 157,856 bp consists of two inverted repeats (IR, 27,673 bp) separated by a large single-copy region (LSC, 85,867 bp) and a small single-copy region (SSC, 16,645 bp). Further annotation revealed the chloroplast genome contains 111 genes, including 78 protein-coding genes, 29 tRNA genes, and 4 rRNA genes. A total of 151 simple sequence repeats (SSRs) were identified in the chloroplast genome. This information will be useful for study on the evolution and genetic diversity of P. pruinosa in the future.http://dx.doi.org/10.1080/23802359.2020.1824593populus pruinosachloroplast genomepacbio sequelphylogeny |
| spellingShingle | Zhong-Shuai Gai Rui Liao Zhen-Bo Jiang Pei-Pei Jiao Shan-He Zhang Rui Qin Hong Liu Zhi-Hua Wu Zhi-Jun Li Complete chloroplast genome sequence of Populus pruinosa Schrenk from PacBio Sequel II Platform Mitochondrial DNA. Part B. Resources populus pruinosa chloroplast genome pacbio sequel phylogeny |
| title | Complete chloroplast genome sequence of Populus pruinosa Schrenk from PacBio Sequel II Platform |
| title_full | Complete chloroplast genome sequence of Populus pruinosa Schrenk from PacBio Sequel II Platform |
| title_fullStr | Complete chloroplast genome sequence of Populus pruinosa Schrenk from PacBio Sequel II Platform |
| title_full_unstemmed | Complete chloroplast genome sequence of Populus pruinosa Schrenk from PacBio Sequel II Platform |
| title_short | Complete chloroplast genome sequence of Populus pruinosa Schrenk from PacBio Sequel II Platform |
| title_sort | complete chloroplast genome sequence of populus pruinosa schrenk from pacbio sequel ii platform |
| topic | populus pruinosa chloroplast genome pacbio sequel phylogeny |
| url | http://dx.doi.org/10.1080/23802359.2020.1824593 |
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