Identification of markers associated with estimated breeding value and horn colour in Hungarian Grey cattle
Objective This study was conducted to estimate effect of single nucleotide polymorphisms (SNP) on the estimated breeding value of Hungarian Grey (HG) bulls and to find markers associated with horn colour. Methods Genotypes 136 HG animals were determined on Geneseek high-density Bovine SNP 150K BeadC...
| Main Authors: | , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Asian-Australasian Association of Animal Production Societies
2021-04-01
|
| Series: | Animal Bioscience |
| Subjects: | |
| Online Access: | http://www.animbiosci.org/upload/pdf/ajas-19-0881.pdf |
| _version_ | 1818336833889632256 |
|---|---|
| author | Attila Zsolnai András Kovács Endre Kaltenecker István Anton |
| author_facet | Attila Zsolnai András Kovács Endre Kaltenecker István Anton |
| author_sort | Attila Zsolnai |
| collection | DOAJ |
| description | Objective This study was conducted to estimate effect of single nucleotide polymorphisms (SNP) on the estimated breeding value of Hungarian Grey (HG) bulls and to find markers associated with horn colour. Methods Genotypes 136 HG animals were determined on Geneseek high-density Bovine SNP 150K BeadChip. A multi-locus mixed-model was applied for statistical analyses. Results Six SNPs were identified to be associated (−log10P>10) with green and white horn. These loci are located on chromosome 1, 3, 9, 18, and 25. Seven loci (on chromosome 1, 3, 6, 9, 10, 28) showed considerable association (−log10P>10) with the estimated breeding value. Conclusion Analysis provides markers for further research of horn colour and supplies markers to achieve more effective selection work regarding estimated breeding value of HG. |
| first_indexed | 2024-12-13T14:45:37Z |
| format | Article |
| id | doaj.art-3ed0e2b3fd0841a696f31ff1538c322c |
| institution | Directory Open Access Journal |
| issn | 2765-0189 2765-0235 |
| language | English |
| last_indexed | 2024-12-13T14:45:37Z |
| publishDate | 2021-04-01 |
| publisher | Asian-Australasian Association of Animal Production Societies |
| record_format | Article |
| series | Animal Bioscience |
| spelling | doaj.art-3ed0e2b3fd0841a696f31ff1538c322c2022-12-21T23:41:29ZengAsian-Australasian Association of Animal Production SocietiesAnimal Bioscience2765-01892765-02352021-04-0134448248810.5713/ajas.19.088124527Identification of markers associated with estimated breeding value and horn colour in Hungarian Grey cattleAttila Zsolnai0András Kovács1Endre Kaltenecker2István Anton3 NAIK-Research Institute for Animal Breeding, Nutrition and Meat Science, Gesztenyés u. 1., 2053 Herceghalom, Hungary NAIK-Research Institute for Animal Breeding, Nutrition and Meat Science, Gesztenyés u. 1., 2053 Herceghalom, Hungary Association of Hungarian Grey Cattle Breeders, Lőportár u. 16.,1134 Budapest, Hungary NAIK-Research Institute for Animal Breeding, Nutrition and Meat Science, Gesztenyés u. 1., 2053 Herceghalom, HungaryObjective This study was conducted to estimate effect of single nucleotide polymorphisms (SNP) on the estimated breeding value of Hungarian Grey (HG) bulls and to find markers associated with horn colour. Methods Genotypes 136 HG animals were determined on Geneseek high-density Bovine SNP 150K BeadChip. A multi-locus mixed-model was applied for statistical analyses. Results Six SNPs were identified to be associated (−log10P>10) with green and white horn. These loci are located on chromosome 1, 3, 9, 18, and 25. Seven loci (on chromosome 1, 3, 6, 9, 10, 28) showed considerable association (−log10P>10) with the estimated breeding value. Conclusion Analysis provides markers for further research of horn colour and supplies markers to achieve more effective selection work regarding estimated breeding value of HG.http://www.animbiosci.org/upload/pdf/ajas-19-0881.pdfhungarian greyhorn colourestimated breeding valuesingle nucleotide polymorphism (snp)genom-wide association study (gwas) |
| spellingShingle | Attila Zsolnai András Kovács Endre Kaltenecker István Anton Identification of markers associated with estimated breeding value and horn colour in Hungarian Grey cattle Animal Bioscience hungarian grey horn colour estimated breeding value single nucleotide polymorphism (snp) genom-wide association study (gwas) |
| title | Identification of markers associated with estimated breeding value and horn colour in Hungarian Grey cattle |
| title_full | Identification of markers associated with estimated breeding value and horn colour in Hungarian Grey cattle |
| title_fullStr | Identification of markers associated with estimated breeding value and horn colour in Hungarian Grey cattle |
| title_full_unstemmed | Identification of markers associated with estimated breeding value and horn colour in Hungarian Grey cattle |
| title_short | Identification of markers associated with estimated breeding value and horn colour in Hungarian Grey cattle |
| title_sort | identification of markers associated with estimated breeding value and horn colour in hungarian grey cattle |
| topic | hungarian grey horn colour estimated breeding value single nucleotide polymorphism (snp) genom-wide association study (gwas) |
| url | http://www.animbiosci.org/upload/pdf/ajas-19-0881.pdf |
| work_keys_str_mv | AT attilazsolnai identificationofmarkersassociatedwithestimatedbreedingvalueandhorncolourinhungariangreycattle AT andraskovacs identificationofmarkersassociatedwithestimatedbreedingvalueandhorncolourinhungariangreycattle AT endrekaltenecker identificationofmarkersassociatedwithestimatedbreedingvalueandhorncolourinhungariangreycattle AT istvananton identificationofmarkersassociatedwithestimatedbreedingvalueandhorncolourinhungariangreycattle |