Changing Antimicrobial Resistance Trends in Kathmandu, Nepal: A 23-Year Retrospective Analysis of Bacteraemia

A comprehensive longitudinal understanding of the changing epidemiology of the agents causing bacteraemia and their AMR profiles in key locations is crucial for assessing the progression and magnitude of the global AMR crisis. We performed a retrospective analysis of routine microbiological data fro...

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Main Authors: Raphaël M. Zellweger, Buddha Basnyat, Poojan Shrestha, Krishna G. Prajapati, Sabina Dongol, Paban K. Sharma, Samir Koirala, Thomas C. Darton, Christine Boinett, Corinne N. Thompson, Guy E. Thwaites, Stephen Baker, Abhilasha Karkey
Format: Article
Language:English
Published: Frontiers Media S.A. 2018-09-01
Series:Frontiers in Medicine
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fmed.2018.00262/full
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author Raphaël M. Zellweger
Buddha Basnyat
Buddha Basnyat
Buddha Basnyat
Poojan Shrestha
Krishna G. Prajapati
Sabina Dongol
Paban K. Sharma
Samir Koirala
Thomas C. Darton
Thomas C. Darton
Christine Boinett
Corinne N. Thompson
Guy E. Thwaites
Guy E. Thwaites
Stephen Baker
Stephen Baker
Stephen Baker
Abhilasha Karkey
Abhilasha Karkey
Abhilasha Karkey
author_facet Raphaël M. Zellweger
Buddha Basnyat
Buddha Basnyat
Buddha Basnyat
Poojan Shrestha
Krishna G. Prajapati
Sabina Dongol
Paban K. Sharma
Samir Koirala
Thomas C. Darton
Thomas C. Darton
Christine Boinett
Corinne N. Thompson
Guy E. Thwaites
Guy E. Thwaites
Stephen Baker
Stephen Baker
Stephen Baker
Abhilasha Karkey
Abhilasha Karkey
Abhilasha Karkey
author_sort Raphaël M. Zellweger
collection DOAJ
description A comprehensive longitudinal understanding of the changing epidemiology of the agents causing bacteraemia and their AMR profiles in key locations is crucial for assessing the progression and magnitude of the global AMR crisis. We performed a retrospective analysis of routine microbiological data from April 1992 to December 2014, studying the time trends of non-Salmonella associated bacteraemia at a single Kathmandu healthcare facility. The distribution of aetiological agents, their antimicrobial susceptibility profiles, and the hospital ward of isolation were assessed. Two hundred twenty-four thousand seven hundred forty-one blood cultures were performed over the study period, of which, 30,353 (13.5%) exhibited growth for non-contaminant bacteria. We observed a significant increasing trend in the proportion of MDR non-Salmonella Enterobacteriaceae (p < 0.001), other Gram-negative organisms (p = 0.006), and Gram-positive organisms (p = 0.006) over time. Additionally, there was an annual increasing trend in the proportion of MDR organisms in bacteria-positive blood cultures originating from patients attending the emergency ward (p = 0.006) and the outpatient department (p = 0.006). This unique dataset demonstrates that community acquired non-Salmonella bacteraemia has become an increasingly important cause of hospital admission in Kathmandu. An increasing burden of bacteraemia associated with MDR organisms in the community underscores the need for preventing the circulation of MDR bacteria within the local population.
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spelling doaj.art-3f433b0d80614690837b7f42274c801d2022-12-22T00:22:02ZengFrontiers Media S.A.Frontiers in Medicine2296-858X2018-09-01510.3389/fmed.2018.00262388524Changing Antimicrobial Resistance Trends in Kathmandu, Nepal: A 23-Year Retrospective Analysis of BacteraemiaRaphaël M. Zellweger0Buddha Basnyat1Buddha Basnyat2Buddha Basnyat3Poojan Shrestha4Krishna G. Prajapati5Sabina Dongol6Paban K. Sharma7Samir Koirala8Thomas C. Darton9Thomas C. Darton10Christine Boinett11Corinne N. Thompson12Guy E. Thwaites13Guy E. Thwaites14Stephen Baker15Stephen Baker16Stephen Baker17Abhilasha Karkey18Abhilasha Karkey19Abhilasha Karkey20Wellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, The Hospital for Tropical Diseases, Ho Chi Minh City, VietnamOxford University Clinical Research Unit, Patan Academy of Health Sciences, Kathmandu, NepalCentre for Tropical Medicine and Global Health, Oxford University, Oxford, United KingdomGlobal Antibiotic Resistance Partnership, Centre for Disease Dynamics Economics and Policy, Washington, DC, United StatesOxford University Clinical Research Unit, Patan Academy of Health Sciences, Kathmandu, NepalPatan Academy of Health Sciences, Patan Hospital, Kathmandu, NepalOxford University Clinical Research Unit, Patan Academy of Health Sciences, Kathmandu, NepalPatan Academy of Health Sciences, Patan Hospital, Kathmandu, NepalOxford University Clinical Research Unit, Patan Academy of Health Sciences, Kathmandu, NepalWellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, The Hospital for Tropical Diseases, Ho Chi Minh City, VietnamSheffield teaching hospitals NHS trust foundation and the University of Sheffield, Sheffield, United KingdomWellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, The Hospital for Tropical Diseases, Ho Chi Minh City, VietnamWellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, The Hospital for Tropical Diseases, Ho Chi Minh City, VietnamWellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, The Hospital for Tropical Diseases, Ho Chi Minh City, VietnamCentre for Tropical Medicine and Global Health, Oxford University, Oxford, United KingdomWellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, The Hospital for Tropical Diseases, Ho Chi Minh City, VietnamCentre for Tropical Medicine and Global Health, Oxford University, Oxford, United KingdomThe Department of Medicine, University of Cambridge, Cambridge, United KingdomOxford University Clinical Research Unit, Patan Academy of Health Sciences, Kathmandu, NepalCentre for Tropical Medicine and Global Health, Oxford University, Oxford, United KingdomGlobal Antibiotic Resistance Partnership, Centre for Disease Dynamics Economics and Policy, Washington, DC, United StatesA comprehensive longitudinal understanding of the changing epidemiology of the agents causing bacteraemia and their AMR profiles in key locations is crucial for assessing the progression and magnitude of the global AMR crisis. We performed a retrospective analysis of routine microbiological data from April 1992 to December 2014, studying the time trends of non-Salmonella associated bacteraemia at a single Kathmandu healthcare facility. The distribution of aetiological agents, their antimicrobial susceptibility profiles, and the hospital ward of isolation were assessed. Two hundred twenty-four thousand seven hundred forty-one blood cultures were performed over the study period, of which, 30,353 (13.5%) exhibited growth for non-contaminant bacteria. We observed a significant increasing trend in the proportion of MDR non-Salmonella Enterobacteriaceae (p < 0.001), other Gram-negative organisms (p = 0.006), and Gram-positive organisms (p = 0.006) over time. Additionally, there was an annual increasing trend in the proportion of MDR organisms in bacteria-positive blood cultures originating from patients attending the emergency ward (p = 0.006) and the outpatient department (p = 0.006). This unique dataset demonstrates that community acquired non-Salmonella bacteraemia has become an increasingly important cause of hospital admission in Kathmandu. An increasing burden of bacteraemia associated with MDR organisms in the community underscores the need for preventing the circulation of MDR bacteria within the local population.https://www.frontiersin.org/article/10.3389/fmed.2018.00262/fullbloodstream infectionsbacteraemiablood culturesurveillancecommunity acquiredantimicrobial resistance
spellingShingle Raphaël M. Zellweger
Buddha Basnyat
Buddha Basnyat
Buddha Basnyat
Poojan Shrestha
Krishna G. Prajapati
Sabina Dongol
Paban K. Sharma
Samir Koirala
Thomas C. Darton
Thomas C. Darton
Christine Boinett
Corinne N. Thompson
Guy E. Thwaites
Guy E. Thwaites
Stephen Baker
Stephen Baker
Stephen Baker
Abhilasha Karkey
Abhilasha Karkey
Abhilasha Karkey
Changing Antimicrobial Resistance Trends in Kathmandu, Nepal: A 23-Year Retrospective Analysis of Bacteraemia
Frontiers in Medicine
bloodstream infections
bacteraemia
blood culture
surveillance
community acquired
antimicrobial resistance
title Changing Antimicrobial Resistance Trends in Kathmandu, Nepal: A 23-Year Retrospective Analysis of Bacteraemia
title_full Changing Antimicrobial Resistance Trends in Kathmandu, Nepal: A 23-Year Retrospective Analysis of Bacteraemia
title_fullStr Changing Antimicrobial Resistance Trends in Kathmandu, Nepal: A 23-Year Retrospective Analysis of Bacteraemia
title_full_unstemmed Changing Antimicrobial Resistance Trends in Kathmandu, Nepal: A 23-Year Retrospective Analysis of Bacteraemia
title_short Changing Antimicrobial Resistance Trends in Kathmandu, Nepal: A 23-Year Retrospective Analysis of Bacteraemia
title_sort changing antimicrobial resistance trends in kathmandu nepal a 23 year retrospective analysis of bacteraemia
topic bloodstream infections
bacteraemia
blood culture
surveillance
community acquired
antimicrobial resistance
url https://www.frontiersin.org/article/10.3389/fmed.2018.00262/full
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