Genome-wide identification and expression analysis of the AAAP family in Fragaria vesca
The amino acid/auxin permease (AAAP) gene family plays a significant role in the long-distance amino acid transport and is involved in plant stress responses and various developmental processes. The functions of the AAAP family have been extensively discussed in multiple organisms, whereas detailed...
| Main Authors: | , , , , , , , , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2020-01-01
|
| Series: | Biotechnology & Biotechnological Equipment |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/13102818.2020.1806107 |
| _version_ | 1818439308869107712 |
|---|---|
| author | Wenwei Liang Lei Ling Mingjie Wang Binghao Du Yadong Duan Penghui Song Lili Zhang Pengju Li Jun Ma Liren Wu Changhong Guo |
| author_facet | Wenwei Liang Lei Ling Mingjie Wang Binghao Du Yadong Duan Penghui Song Lili Zhang Pengju Li Jun Ma Liren Wu Changhong Guo |
| author_sort | Wenwei Liang |
| collection | DOAJ |
| description | The amino acid/auxin permease (AAAP) gene family plays a significant role in the long-distance amino acid transport and is involved in plant stress responses and various developmental processes. The functions of the AAAP family have been extensively discussed in multiple organisms, whereas detailed information of this family in strawberry (Fragaria vesca) has not been reported yet. In this study, we identified 45 AAAP genes in the strawberry genome. Phylogenetic analysis indicated that AAAPs from strawberry and Arabidopsis were clustered into eight groups. Expression analysis of the AAAP family showed that AAAP genes were expressed differentially in different developmental stages of flower and fruit, and were significantly induced after Colletotrichum gloeosporioides infection. Our study provides a comprehensive understanding of the strawberry AAAP family and demonstrates their potential roles in disease resistance, providing more reference for further research. |
| first_indexed | 2024-12-14T17:54:24Z |
| format | Article |
| id | doaj.art-3fdd225b754349aea9d060fb833a5501 |
| institution | Directory Open Access Journal |
| issn | 1310-2818 1314-3530 |
| language | English |
| last_indexed | 2024-12-14T17:54:24Z |
| publishDate | 2020-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Biotechnology & Biotechnological Equipment |
| spelling | doaj.art-3fdd225b754349aea9d060fb833a55012022-12-21T22:52:34ZengTaylor & Francis GroupBiotechnology & Biotechnological Equipment1310-28181314-35302020-01-0134179079910.1080/13102818.2020.18061071806107Genome-wide identification and expression analysis of the AAAP family in Fragaria vescaWenwei Liang0Lei Ling1Mingjie Wang2Binghao Du3Yadong Duan4Penghui Song5Lili Zhang6Pengju Li7Jun Ma8Liren Wu9Changhong Guo10Key Laboratory of Molecular Cytogenetics and Genetic Breeding of Heilongjiang Province, College of Life Science and Technology, Harbin Normal UniversityKey Laboratory of Molecular Cytogenetics and Genetic Breeding of Heilongjiang Province, College of Life Science and Technology, Harbin Normal UniversityBerry Resources Laboratory, Rural Revitalization Science and Technology Research Institute, Heilongjiang Academy of Agricultural SciencesKey Laboratory of Molecular Cytogenetics and Genetic Breeding of Heilongjiang Province, College of Life Science and Technology, Harbin Normal UniversityBerry Resources Laboratory, Rural Revitalization Science and Technology Research Institute, Heilongjiang Academy of Agricultural SciencesBerry Resources Laboratory, Rural Revitalization Science and Technology Research Institute, Heilongjiang Academy of Agricultural SciencesBerry Resources Laboratory, Rural Revitalization Science and Technology Research Institute, Heilongjiang Academy of Agricultural SciencesBerry Resources Laboratory, Rural Revitalization Science and Technology Research Institute, Heilongjiang Academy of Agricultural SciencesSunflower Laboratory, Cash Crop Research Institute, Heilongjiang Academy of Agricultural SciencesSunflower Laboratory, Cash Crop Research Institute, Heilongjiang Academy of Agricultural SciencesKey Laboratory of Molecular Cytogenetics and Genetic Breeding of Heilongjiang Province, College of Life Science and Technology, Harbin Normal UniversityThe amino acid/auxin permease (AAAP) gene family plays a significant role in the long-distance amino acid transport and is involved in plant stress responses and various developmental processes. The functions of the AAAP family have been extensively discussed in multiple organisms, whereas detailed information of this family in strawberry (Fragaria vesca) has not been reported yet. In this study, we identified 45 AAAP genes in the strawberry genome. Phylogenetic analysis indicated that AAAPs from strawberry and Arabidopsis were clustered into eight groups. Expression analysis of the AAAP family showed that AAAP genes were expressed differentially in different developmental stages of flower and fruit, and were significantly induced after Colletotrichum gloeosporioides infection. Our study provides a comprehensive understanding of the strawberry AAAP family and demonstrates their potential roles in disease resistance, providing more reference for further research.http://dx.doi.org/10.1080/13102818.2020.1806107fragaria vescaaaap proteingenome-wideexpression analysisanthracnosecolletotrichum gloeosporioides |
| spellingShingle | Wenwei Liang Lei Ling Mingjie Wang Binghao Du Yadong Duan Penghui Song Lili Zhang Pengju Li Jun Ma Liren Wu Changhong Guo Genome-wide identification and expression analysis of the AAAP family in Fragaria vesca Biotechnology & Biotechnological Equipment fragaria vesca aaap protein genome-wide expression analysis anthracnose colletotrichum gloeosporioides |
| title | Genome-wide identification and expression analysis of the AAAP family in Fragaria vesca |
| title_full | Genome-wide identification and expression analysis of the AAAP family in Fragaria vesca |
| title_fullStr | Genome-wide identification and expression analysis of the AAAP family in Fragaria vesca |
| title_full_unstemmed | Genome-wide identification and expression analysis of the AAAP family in Fragaria vesca |
| title_short | Genome-wide identification and expression analysis of the AAAP family in Fragaria vesca |
| title_sort | genome wide identification and expression analysis of the aaap family in fragaria vesca |
| topic | fragaria vesca aaap protein genome-wide expression analysis anthracnose colletotrichum gloeosporioides |
| url | http://dx.doi.org/10.1080/13102818.2020.1806107 |
| work_keys_str_mv | AT wenweiliang genomewideidentificationandexpressionanalysisoftheaaapfamilyinfragariavesca AT leiling genomewideidentificationandexpressionanalysisoftheaaapfamilyinfragariavesca AT mingjiewang genomewideidentificationandexpressionanalysisoftheaaapfamilyinfragariavesca AT binghaodu genomewideidentificationandexpressionanalysisoftheaaapfamilyinfragariavesca AT yadongduan genomewideidentificationandexpressionanalysisoftheaaapfamilyinfragariavesca AT penghuisong genomewideidentificationandexpressionanalysisoftheaaapfamilyinfragariavesca AT lilizhang genomewideidentificationandexpressionanalysisoftheaaapfamilyinfragariavesca AT pengjuli genomewideidentificationandexpressionanalysisoftheaaapfamilyinfragariavesca AT junma genomewideidentificationandexpressionanalysisoftheaaapfamilyinfragariavesca AT lirenwu genomewideidentificationandexpressionanalysisoftheaaapfamilyinfragariavesca AT changhongguo genomewideidentificationandexpressionanalysisoftheaaapfamilyinfragariavesca |